pyVISCOUS: An open-source tool for computationally frugal global sensitivity analysis
Bibliographic record
Abstract
Sensitivity analysis is used to increase our understanding of the evaluated model and ease model parameter estimation. VISCOUS (VarIance-based Sensitivity analysis using COpUlaS) is a given-data, computationally frugal variance-based global sensitivity analysis framework. Grounded in Copula theory, VISCOUS computes the Sobol sensitivity indices using a probability model that describes the relationship between model inputs (e.g., the perturbations in the model parameters) and outputs (e.g., the model responses given a parameter perturbation). In this technical note, we make three contributions to make the VISCOUS framework easier to understand and apply. First, we provide additional derivations of VISCOUS to connect the VISCOUS framework to recent developments in the data science community. We provide didactic examples with simple test functions in order to help a wider group of modelers understand the underpinnings of the VISCOUS framework. Second, we evaluate the VISCOUS framework using three types of Sobol functions and provide a cautionary note on using VISCOUS to approximate Sobol’ sensitivity indices for applications where model inputs are of similar importance. Third, we provide an open-source code of VISCOUS in Python, namely, pyVISCOUS. pyVISCOUS is model-independent and can be applied with user-provided input-output data.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.003 | 0.016 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.002 |
| Bibliometrics | 0.002 | 0.001 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.002 | 0.003 |
| Open science | 0.002 | 0.004 |
| Research integrity | 0.002 | 0.003 |
| Insufficient payload (model declined to judge) | 0.050 | 0.009 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".