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A supergene affects steroid metabolism during early ontogeny in a bird with alternative reproductive morphs

2022· preprint· en· W4309677208 on OpenAlexafffund
Lina M. Giraldo‐Deck, Jasmine L. Loveland, Wolfgang Goymann, David B. Lank, Clemens Küpper

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
Canadian institutionsSimon Fraser University
FundersSimon Fraser UniversityMax-Planck-GesellschaftInternational Max Planck Research School for Environmental, Cellular and Molecular Microbiology
KeywordsBiologyAndrogenAndrostenedioneTestosterone (patch)OntogenyEndocrinologySexual differentiationInternal medicineHormoneGeneGenetics

Abstract

fetched live from OpenAlex

Reproductive phenotypes are shaped by genetic, physiological and environmental variation that an organism experiences during ontogeny. Steroid hormones play an integrative role in this process through both genomic and non-genomic pathways. Differences in steroid hormone metabolism may be rooted in genomic variation. Here we evaluate the influence of supergene variants underlying alternative reproductive tactics on sex steroid metabolism during ontogeny in ruffs (Calidris pugnax). Adult ruff males exhibit three male mating morphs called Independents, Faeders and Satellites, that differ prominently in circulating androgen (testosterone and androstenedione) concentrations. Across morphs and sexes chicks showed similar mean androgen concentrations during ontogenetic development. However, variances in circulating androgens showed the same pattern as corresponding variances previously observed in adults. HSD17B2 had been previously identified as a key gene for mediating differences in androgen levels between morphs as it encodes the enzyme that converts testosterone to androstenedione and is located within the supergene. Observed HSD17B2 expression in embryonic brain tissue was consistent with predictions based on genetic and endocrine differences. Taken together, the observed differences in circulating androgen concentrations and gene expression point to testosterone synthesis as a key mechanism that shapes developmental trajectories and differences in brain organization among morphs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.254
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2022
Admission routes2
Has abstractyes

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