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Record W4309862674 · doi:10.1016/j.ymthe.2022.11.005

Transient expression of factor VIII and a chronic high-fat diet induces ER stress and late hepatocyte oncogenesis

2022· letter· en· W4309862674 on OpenAlexaff
Glenn F. Pierce, Aras N. Mattis

Bibliographic record

VenueMolecular Therapy · 2022
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVirus-based gene therapy research
Canadian institutionsCanadian Hemophilia Society
Fundersnot available
KeywordsEndoplasmic reticulumGenetic enhancementFactor IXTransgeneRecombinant DNAClotting factorUnfolded protein responseToxicityMedicineBiologyGeneHepatocyte growth factorCancer researchImmunologyPharmacologyInternal medicineCell biologyGeneticsReceptor

Abstract

fetched live from OpenAlex

Liver-directed gene therapy using adeno-associated virus (AAV) for delivery of therapeutic transgenes has posed particular challenges over the past 25 years, and there are no FDA-approved products to date. Reasons include lack of efficacy or toxicity or both, despite acceptable efficacy and toxicology results in animals, including non-human primates. The experience with AAV-mediated gene therapy for hemophilia is a case in point. The clotting factor VIII gene was cloned in 1984, but production of the full-length recombinant protein is challenging. Despite this, two therapeutic recombinant factor VIII proteins were approved and marketed by 1993. A subsequent B-domain deleted (BDD) version of factor VIII (FVIII) proved more efficient to manufacture in cell lines than full-length FVIII. However, it was later recognized that high levels of FVIII expression are responsible for an endoplasmic reticulum (ER) stress response in cells. 1 Malhotra J.D. Miao H. Zhang K. Wolfson A. Pennathur S. Pipe S.W. Kaufman R.J. Antioxidants reduce endoplasmic reticulum stress and improve protein secretion. Proc. Natl. Acad. Sci. USA. 2008; 105: 18525-18530https://doi.org/10.1073/pnas.0809677105 Crossref PubMed Scopus (546) Google Scholar With the enigmatic toxicity seen in AAV-factor VIII gene therapy trials, all of which use the BDD factor VIII, investigation redoubled into whether an ER stress response may be responsible for the variable and diminishing levels of factor VIII observed in the clinical trials.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.009
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0090.006
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.272
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2022
Admission routes1
Has abstractno

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