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Record W4310484205 · doi:10.1101/2022.11.29.22282870

NeuropsychBrainAge: a biomarker for conversion from mild cognitive impairment to Alzheimer’s disease

2022· preprint· en· W4310484205 on OpenAlexfundno aff
Jorge García Condado, Jesús M. Cortés

Bibliographic record

VenuemedRxiv · 2022
Typepreprint
Languageen
FieldMedicine
TopicDementia and Cognitive Impairment Research
Canadian institutionsnot available
FundersNational Institute of Biomedical Imaging and BioengineeringCanadian Institutes of Health ResearchFundación Bancaria Caixa d'Estalvis i Pensions de BarcelonaGenentechIXICOServierH. Lundbeck A/SIkerbasque, Basque Foundation for ScienceEisaiPfizerNovartis Pharmaceuticals CorporationF. Hoffmann-La RocheBiogenEli Lilly and CompanyBristol-Myers SquibbBioClinicaU.S. Department of DefenseAlzheimer's Disease Neuroimaging InitiativeMeso Scale DiagnosticsNational Institute on AgingAlzheimer's Association
KeywordsNeuroimagingNeuropsychologyBiomarkerImaging biomarkerCognitive impairmentNeuropsychological assessmentCognitionPsychologyDementiaDiseaseNeuroscienceArtificial intelligenceAudiologyMedicineCognitive psychologyInternal medicineRadiologyComputer scienceMagnetic resonance imagingBiologyGenetics

Abstract

fetched live from OpenAlex

Abstract Background BrainAge models based on neuroimaging data have shown good accuracy for diagnostic classification. However, they have replicability issues due to site and patient variability intrinsic to neuroimaging techniques. We aimed to develop a BrainAge model trained on neuropsychological tests to identify a biomarker to distinguish stable mild cognitive impairment (sMCI) from progressive mild cognitive impairment (pMCI) to Alzheimer’s disease (AD). Methods Using a linear regressor, a BrainAge model was trained on healthy controls (CN) based on neuropsychological tests. The model was applied to sMCI and pMCI subjects to obtain predicted ages. The BrainAge delta, the predicted age minus the chronological age, was used as a biomarker to distinguish between sMCI and pMCI. We compared the model to one trained on neuroimaging features. Findings The AUC of the ROC curve for differentiating sMCI from pMCI was 0.91. It greatly outperforms the model trained on neuroimaging features which only obtains an AUC of 0.681. The AUC achieved is at par with the State-of-the-Art BrainAge models that use Deep Learning. The BrainAge delta was correlated with the time to conversion, the time taken for a pMCI subject to convert to AD. Interpretation We suggest that the BrainAge delta trained only with neuropsychological tests is a good biomarker to distinguish between sMCI and pMCI. This opens up the possibility to study other neurological and psychiatric disorders using this technique but with different neuropsychological tests. Funding A full list of funding bodies that supported this study can be found in the Acknowledgments section. Research in Context Evidence before this study A major application of recent neuroimaging BrainAge models has been demonstrating its value in diagnostic classification. In spite of the good performance, most models based on neuroimaging data have limitations in real data as the distribution between sites can be different from training cohorts. They can also suffer from lack of specificity to a disease, for those based on BrainAge deltas trained on healthy controls or insufficient training data, for those trained to directly identify a specific disease. We develop a BrainAge model trained on neuropsychological tests used in Alzheimer’s disease research to identify a biomarker to distinguish sMCI from pMCI subjects. We propose a model that is trained on healthy controls for which there is more data to then reliably distinguish sMCI from pMCI subjects. Added value of this study This is the first study to use a BrainAge model based on neuropsychological test features to study Alzheimer’s disease. We suggest the NeuropsychBrainAge delta, which measure the difference between the model predicted age of the subject trained on healthy controls and the chronological age of the subject, as a biomarker of Alzheimer’s Disease. The NeuropsychBrainAge delta could differentiate between sMCI and pMCI. Moreover, we also show that the proposed biomarker is correlated with the time to conversion, the time taken for a pMCI subject to convert to Alzheimer’s Disease. Implications of all the available evidence Our approach could be used for the identification of patients with mild cognitive impairment at risk of developing Alzheimer’s disease. The NeuropsychBrainAge delta can also be used as a quantitative marker to measure disease severity due to its correlation with time to conversion. This study shows that using healthy controls for which there is more data but using features specific to a disease such as neuropsychological test can lead to reliable BrainAge models to identify specific neurological and psychiatric disorders.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.063
GPT teacher head0.369
Teacher spread0.306 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2022
Admission routes1
Has abstractyes

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