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Record W4310781447 · doi:10.1093/plphys/kiac555

Unique opportunities for future research on the alternative oxidase of plants

2022· article· en· W4310781447 on OpenAlexafffund
Allison E. McDonald

Bibliographic record

VenuePLANT PHYSIOLOGY · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPhotosynthetic Processes and Mechanisms
Canadian institutionsWilfrid Laurier University
FundersNatural Sciences and Engineering Research Council of CanadaWilfrid Laurier University
KeywordsAlternative oxidaseBiologyBiotechnologyComputational biologyBiochemistryEnzyme

Abstract

fetched live from OpenAlex

Alternative oxidase (AOX) is a terminal oxidase present in the electron transport system of all plants examined to date that plays an important role in the responses to abiotic and biotic stresses. Due to recent advances in cell and tissue culture, genetic engineering, and bioinformatic resources for nonmodel plants, it is now possible to study AOX in a broader diversity of species to investigate the full taxonomic distribution of AOX in plants. Additional functions of AOX should be investigated in thermogenic, carnivorous, and parasitic plants with atypical life histories. Recent methodological improvements in oxygen sensing, clustered regularly interspaced short palindromic repeats technology, and protein biochemistry will allow for considerable advancement on questions that have been long standing in the field due to experimental limitations. The role of AOX in secondary metabolism and mitochondrial metabolic pathways should also be examined due to recent discoveries in analogous systems in other organelles and fungi.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.016
Threshold uncertainty score0.053

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.003
Scholarly communication0.0030.008
Open science0.0020.002
Research integrity0.0040.004
Insufficient payload (model declined to judge)0.0160.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.104
GPT teacher head0.324
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2022
Admission routes2
Has abstractyes

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Same venuePLANT PHYSIOLOGYSame topicPhotosynthetic Processes and MechanismsFrench-language works237,207