MECHANISMS AND CONSEQUENCES OF CROSS-GENERATIONAL ACCLIMATIZATION IN REEF-BUILDING CORALS
Bibliographic record
Abstract
Coral reefs are valued over trillions of dollars and are becoming increasingly degraded due to global climate change. Ocean warming disrupts the symbiotic relationship between corals and their algal symbiont, Symbiodinaceae, leading to severe energetic reduction and increased mortality. Recent studies have identified the potential for beneficial within-generational and cross-generational acclimatization to mitigate the impacts of future environmental change, however the mechanisms and outcomes remain understudied in tropical corals. Here, I present three manuscripts testing different mechanisms of within- and cross-generational acclimatization in corals to understand the long-term consequences of ocean warming. First, we tested the hypothesis that the survival in response to thermal stress is dependent on the metabolic capacity of the coral holobiont and associated microbial partners. We designed a 52-day thermal stress experiment on adult Porites astreoides colonies and examined physiological, microbiome, and metabolomic profiles. We determined that prior to thermal stress, colonies that exhibited higher metabolic capacity and more diverse bacterial communities survived prolonged bleaching with no tissue loss. During late-stage bleaching, colonies that primarily utilized carbohydrate storage showed signs of mortality, indicating that catabolizing multiple energy reserves, as opposed to just carbohydrates, may be an effective strategy in surviving bleaching events. To expand our understanding on the cross-generational consequences of coral bleaching, the next experiment tested the hypothesis that environmental memory plays a significant role in the physiological outcomes in response to thermal stress within and across coral generations. We designed a year-long experiment to manipulate eight different thermal histories in adult corals and monitored the physiological impacts on the adult colonies and subsequent offspring. Site of origin was the main predictor in determining the physiological responses at both adult and larval stages when assessing coral metabolic capacity and energetic reserves. Increased endosymbiont plasticity was observed in parental colonies and subsequent offspring who experienced a simulated bleaching event the year prior, outlining the long-term multigenerational impacts of thermal stress on corals. The final study tested the hypothesis that DNA methylation is a mechanism of environmental memory in corals and can be inherited across generations. Epigenetic mechanisms, such as DNA methylation, can be environmentally sensitive and heritable across generations, thus are a likely mechanism for the inheritance of phenotypic traits. We performed whole-genome bisulfite sequencing on adult colonies and their larvae from four different manipulated thermal histories to generate single-base pair resolution of DNA methylation data to test the effects of parental site of origin, a
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.001 | 0.001 |
| Open science | 0.000 | 0.001 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".