MétaCan
Menu
Back to cohort
Record W4312032574 · doi:10.21203/rs.3.rs-2347144/v1

Fully Automated Agatston score calculation from ECG gated Cardiac CT using Deep learning and Multiorgan Segmentation: A Validation study

2022· preprint· en· W4312032574 on OpenAlexaff
Ashish Gautam, Prashant Raghav, Vijay Subramanya, Sunil Kumar, Sudeep Kumar, Dharmendra Jain, Ashish Verma, Parminder Singh, Manphoul Singhal, Vikas Gupta, Samir Rathore, Srikanth Iyengar, Sudhir Rathore

Bibliographic record

VenueResearch Square · 2022
Typepreprint
Languageen
FieldMedicine
TopicCardiovascular Disease and Adiposity
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsArtificial intelligenceSegmentationDeep learningCorrelationCorrelation coefficientReceiver operating characteristicGold standard (test)Convolutional neural networkComputer sciencePattern recognition (psychology)MedicineRadiologyMachine learningMathematics

Abstract

fetched live from OpenAlex

Abstract Purpose: To evaluate deep learning-based calcium segmentation and quantification on ECG gated Cardiac CT scans compared with manual evaluation. Methods:Automated calcium quantification was performed using a combination of deep-learning convolution neural networks based on Mask R CNN for multiorgan segmentation. Calcifications were identified automatically, after which the algorithm automatically excluded all non-coronary calcifications using 2D erosion, dilation, volume, and maximum intensity threshold and by applying cardiac, aortic, and epicardial fat segmentation. This study used 40 patients to train and test the segmentation model. Results:110 patients were tested for the validation of the algorithm. The Pearson correlation coefficient between the reference actual and the computed predictive scores on the test set show high level of correlation (0.84; p < 0.001) and high limits of agreement in Bland-Altman plot. The proposed method correctly classifies the risk group in 75.2% of the cases and classifies the subjects in the same group. 81% of the predictive scores lie in the same categories and only seven patients out of 110 were more than one category off. For the presence/absence of coronary artery calcifications, the deep learning model achieved a sensitivity of 90 % and a specificity of 94 %. Conclusion: Fully automated deep learning-based calcium quantification on cardiac-CTs shows good correlation compared to reference standards. Automating this process may reduce evaluation time and potentially optimize clinical calcium scoring without additional resources.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.411
Teacher spread0.347 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

Explore more

Same venueResearch SquareSame topicCardiovascular Disease and AdiposityFrench-language works237,207