MétaCan
Menu
Back to cohort
Record W4312565055 · doi:10.1002/ppj2.20056

Data sharing in plant phenotyping research: Perceptions, practices, enablers, barriers and implications for science policy on data management

2022· article· en· W4312565055 on OpenAlexafffund
Albert I. Ugochukwu, Peter W.B. Phillips

Bibliographic record

VenueThe Plant Phenome Journal · 2022
Typearticle
Languageen
FieldComputer Science
TopicResearch Data Management Practices
Canadian institutionsUniversity of Saskatchewan
FundersCanada First Research Excellence Fund
KeywordsInteroperabilityData sharingIncentiveReuseOpen scienceData scienceData managementScience policyKnowledge managementMetadataComputer scienceWorld Wide WebPolitical scienceDatabaseEngineering

Abstract

fetched live from OpenAlex

Abstract The application of new technologies in scientific research, particularly automated sensing of plant phenotypic performance, has resulted in a deluge of data and raised the question of how these data can be efficiently managed and shared. Many studies have examined the benefits and constraints of data sharing in different disciplines. We focus on plant phenotyping due to the increasing volume of digital data generated in multi‐disciplinary plant phenotyping research. Data sharing and reuse practices in plant phenotyping research have not been widely explored. Study results show that data sharing in plant phenotyping research occurs mostly through direct personal requests based on trust relationships and technical supplements (appendices) to publications, and researchers are willing to share data if incentives and policies are aligned to overcome the barriers. This paper provides empirical evidence to guide the establishment of incentive systems and policy frameworks that support FAIR (findability, accessibility, interoperability, and reusability) data, promote behavioral change, and enhance data sharing for the advancement of science and innovation by research communities, institutions, policymakers, and funders.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.235
metaresearch head score (Gemma)0.341
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Open science
Consensus categoriesMetaresearch
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.997
Threshold uncertainty score0.943

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2350.341
Meta-epidemiology (narrow)0.0000.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.007
Science and technology studies0.0090.016
Scholarly communication0.0160.021
Open science0.0030.016
Research integrity0.0030.004
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.539
GPT teacher head0.480
Teacher spread0.059 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designObservational
DomainReproducibility
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2022
Admission routes2
Has abstractyes

Explore more

Same venueThe Plant Phenome JournalSame topicResearch Data Management PracticesFrench-language works237,207