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Record W4313006958 · doi:10.56588/iabcd.v1i1.27

GENOMIC, EPIGENOMIC AND PROTEOMIC LANDSCAPING OF HEPATOCELLULAR CARCINOMA

2022· article· en· W4313006958 on OpenAlexaff
Nandan Dixit, Harsha Motwani, Mansi Bhavsar, Soumya Patel, Hitesh Solanki, Rakesh Rawal

Bibliographic record

VenueInternational Association of Biologicals and Computational Digest · 2022
Typearticle
Languageen
FieldMedicine
TopicFerroptosis and cancer prognosis
Canadian institutionsImpact
Fundersnot available
KeywordsHepatocellular carcinomaEpigeneticsMalignancyEpigenomicsMedicineCancerMetastasisCarcinogenesisDiseaseBioinformaticsOncologyInternal medicineBiologyDNA methylationGeneGenetics

Abstract

fetched live from OpenAlex

Hepatocellular carcinoma (HCC) is one of the most common and fatal malignancy in humans and proves to be the third most common cause of cancer-related death. Thus, HCC contributes to major international health problem because its incidence is exponentially increasing in many countries. One of the main reasons for the lethality of HCC is the lack of diagnostic markers for early detection of the disease. At late stages, HCC shows a high clinical heterogeneity with poor prognosis i.e. high tumor recurrence is observed in 60-70% of cases within 5 years after surgery. One of the major reasons is that most patients with HCC were diagnosed at advanced stages. It is crucial to find out new therapeutic targets and novel diagnostic biomarkers for the early diagnosis and timely treatment of HCC and to develop preventive strategies and therapeutic interventions based on an improved understanding of molecular hepato carcinogenesis. Therefore, it is still urgent to further explore the exact molecular mechanisms of the development, progression, invasion, and metastasis of HCC. It has been shown that both genetic and epigenetic alterations are crucial for the initiation of HCC, thus making epigenetics a promising and attractive field for identifying the subset of patients at a high risk of recurrence and with dismal survival outcomes.However, the underlying molecular mechanisms remain unknown. Thus, it is urgent and important to dig the hub molecules and to uncover the key molecular mechanisms. Due to the advances made in research based on next generation sequencers, it is now possible to detect and analyse epigenetic abnormalities associated with cancer. In this review article we are trying to explore previously reported to play key role in HCC development and progression such as, DNA methylation, various histone modifications, chromatin remodelling, and non-coding RNA associated gene silencing are considered to be transcriptional regulatory mechanisms associated with gene expression changes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.015
Threshold uncertainty score0.246

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.247
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

Explore more

Same venueInternational Association of Biologicals and Computational DigestSame topicFerroptosis and cancer prognosisFrench-language works237,207