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Phosphoinositide 3-kinase and airway infections in severe asthmatics

2022· article· en· W4313125930 on OpenAlexaff
Anurag Bhalla, K Radford, K Zhang, Z Brautigam, C Huang, M Kjarsgaard, N Lavigne, Åsa Fex Svenningsen, G Pare, M Mukherjee, P Nair

Bibliographic record

Venue03.02 - Airway cell biology and immunopathology · 2022
Typearticle
Languageen
FieldHealth Professions
TopicPediatric health and respiratory diseases
Canadian institutionsMcMaster University
Fundersnot available
KeywordsPhosphoinositide 3-kinasePI3K/AKT/mTOR pathwayImmunologyMedicineBronchitisGene isoformBiologyMolecular biologyInternal medicineGeneSignal transduction

Abstract

fetched live from OpenAlex

Introduction: Increased phosphoinositide 3-kinase activity (PI3K) is linked to respiratory infections. A significant proportion of severe asthmatics (SA) get recurrent airway infections. Aims and objectives: We investigated the relationship between PI3K activation, histone deacetylase (HDAC) and macrophage receptor with collagenous structure (MARCO) expression in SA±recurrent bacterial bronchitis. Methods: Peripheral blood was collected from 7 healthy subjects and 25 SA (±recurrent bacterial bronchitis) to measure PI3K activity, MARCO and HDAC levels. Sputa (n=19) were examined for in situ PI3K activity and gene expression of PI3K isoforms (digital PCR). Results: Asthmatics with recurrent infections had higher blood PI3K activity (demonstrated as inverse of biotinylated-PIP3, p=0.02), MARCO expression (p=0.01), and trend for lower HDAC expression (p=0.067) vs. healthy donors (Fig 1). Only PI3KCD (encoding catalytic delta isoform) gene expression relative to HPRT1 (housekeeping gene) was increased in SA-infection group (Fig 1, p=0.03). A higher number of asthmatics with recurrent infections were on oral corticosteroids (p=0.015) and replacement immunoglobulins (p=0.016). Conclusions: PI3K activity is increased in SA with recurrent infections, which is associated with a decrease in HDAC and MARCO expression. Targeting PI3K pathway, specifically the delta isoform, may be a potential therapeutic target in SA with mixed-granulocytic bronchitis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.322
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2022
Admission routes1
Has abstractyes

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