Spectral-Temporal Saliency Masks and Modulation Tensorgrams for Generalizable COVID-19 Detection
Bibliographic record
Abstract
Speech COVID-19 detection systems have gained popularity as they represent an easy-to-use and low-cost solution that is well suited for at-home long-term monitoring of patients with persistent symptoms. Recently, however, the limited generalization capability of existing deep neural network based systems to unseen datasets has been raised as a serious concern, as has their limited interpretability. In this paper, we propose two innovations to help overcome these issues. First, we propose the use of a 3-dimensional modulation frequency tensor (called modulation tensorgram representation, MTR) as input to a convolutional recurrent neural network for COVID-19 detection. The representation is known to provide robustness against different environmental factors seen across datasets. Next, we propose the use of spectro-temporal saliency masking to aggregate regions of the MTR related to COVID-19, thus helping further improve the generalizability and interpretability of the model. Experiments are conducted on three public datasets and results show the proposed solution consistently outperforming two benchmark systems in within-, across-, and unseen-dataset tests. The proposed method relies on a similar number of parameters to the benchmark, thus a promising solution for at-home monitoring of COVID-19 infection.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.004 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.001 | 0.001 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".