MétaCan
Menu
Back to cohort

Lack of direct antigenic processing results in delayed CD8+ T cell response, which fails to control <i>Salmonella typhimurium</i> infection (58.12)

2011· article· en· W4313351785 on OpenAlexaff
Fanny Tzelepis, Valeria Alcon, Holger Rüssmann, Lakshmi Krishnan, Subash Sad

Bibliographic record

VenueThe Journal of Immunology · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer Research and Treatments
Canadian institutionsInstitute for Biological SciencesUniversity of Ottawa
Fundersnot available
KeywordsBiologyAntigenCytotoxic T cellSecretionMicrobiologyCD8VirulenceT cellAntigen-presenting cellCross-presentationAntigen presentationImmunologyMHC class IImmune systemIn vitro

Abstract

fetched live from OpenAlex

Abstract CD8+ T cells are activated rapidly to control prolific pathogens, however this is not the case during Salmonella typhimurium (ST) infection. In resistant mice, recombinant ST expressing ovalbumin (ST-OVA) induces a delayed CD8 T cells response and a chronic infection is established. As ST-OVA resides in the phagosomes of infected cells, CD8+ T cells are considered to be activated by the alternative cross-presentation pathway. We wanted to address if the CD8 T cells can be activated through the classical MHC-I antigen presentation in this model, and whether that would improve the control of virulent ST-OVA infection. We modified ST to secrete and translocate the immunodominant antigen OVA directly to the cytosol of infected cells through the bacterial type III secretion system. Our results reveal that this modification induces rapid antigen-presentation, which results in profound CD8+ T cell response and differentiation into memory cells. More importantly, this modification makes the targets susceptible to CD8+ T cell-mediated death, which results in abridgment of ST persistence even in susceptible hosts. Thus, lack of direct antigen-processing in ST infected cells facilitates the virulence of ST and perpetuation of infection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.290
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

Explore more

Same venueThe Journal of ImmunologySame topicCancer Research and TreatmentsFrench-language works237,207