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Invariant natural killer T cells recognize and restrict the transformation of B cells by Epstein-Barr virus (P4363)

2013· article· en· W4313354650 on OpenAlexaff
Brian K. Chung, Kevin Tsai, William T. Gibson, Peter van den Elzen, John J. Priatel, Rusung Tan

Bibliographic record

VenueThe Journal of Immunology · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Cell Function and Interaction
Canadian institutionsChild and Family Research InstituteUniversity of British Columbia
Fundersnot available
KeywordsCD1DBiologyNatural killer T cellImmunologyAntigenCell biologyImmune systemT cell

Abstract

fetched live from OpenAlex

Abstract Individuals with X-linked lymphoproliferative disease (XLP) lack invariant natural killer T (iNKT) cells and are uniquely susceptible to Epstein-Barr virus (EBV). To determine whether iNKT cells recognize or regulate EBV replication, human B cells were infected with GFP+ EBV 95.8 in the presence or absence of iNKT cells. We observed that iNKT cells significantly reduced early EBV titres and GFP+ B cell expansion but that within 72 hours of infection, B cells transformed into lymphoblastoid cell lines (LCL) by EBV had downregulated the iNKT antigen receptor CD1d, completely abrogating iNKT recognition of the lipid agonist α-galactosylceramide (αGalCer). To determine whether ectopic CD1d expression could restore iNKT recognition, LCL were treated with a synthetic retinoic acid receptor-α agonist AM580 known to modulate CD1d expression by regulating the nuclear protein lymphoid enhancer-binding factor-1 (LEF-1). AM580 treatment significantly reduced LEF-1 at the CD1d promoter, induced surface CD1d expression and enabled iNKT recognition of LCL loaded with αGalCer. Unexpectedly, AM580-treated LCL also activated iNKT function even in the absence of αGalCer suggesting that EBV infection and transformation triggers endogenous iNKT antigen expression. These observations indicate that iNKT cells may be important for the early recognition and control of EBV-infected B cells prior to CD1d downregulation and the loss of CD1d may allow EBV to circumvent iNKT-mediated immunosurveillance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.200
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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