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Ankyrin Repeat Domain 22 Mediates Host Defense Against Viral Infection Through STING Signaling Pathway

2016· article· en· W4313379411 on OpenAlexaff
Lianghua Bin, Xiaozhao Li, Juntao Feng, Brittany Richers, Donald Y.M. Leung

Bibliographic record

VenueThe Journal of Immunology · 2016
Typearticle
Languageen
FieldImmunology and Microbiology
Topicinterferon and immune responses
Canadian institutionsJewish Rehabilitation Hospital
Fundersnot available
KeywordsBiologyInterferonInnate immune systemVirusVirologyHerpes simplex virusStingImmune systemViral replicationAntiviral proteinPeripheral blood mononuclear cellRNAImmunologyIn vitroGeneGenetics

Abstract

fetched live from OpenAlex

Abstract The innate immune system is critical for early detection of invading viruses and for initiating cellular host defense countermeasures, which include the production of interferons. Ankyrin repeat domain 22 (ANKRD22) encodes a protein of 191 amino acids containing 2 ankyrin repeating domain, and its biological function was unknown. In this study, we find that ANKRD22 expression can be significantly induced in human peripheral blood mononuclear cells (PBMCs) by DNA virus herpes simplex virus -1(HSV-1) and RNA virus respiratory syncytial virus (RSV) as well as IFN-α and IFN-γ. Its induction in PBMCs by viruses is largely a secondary effect of virus-induced interferons. We further demonstrate that ANKRD22 was majorly induced in monocytes and dendritic cells from PBMCs. Over-expression of ANKRD22 confers protection against HSV-1 and RSV infection in multiple tested cell lines. Vice versa, inhibition of ANKRD22 leads to enhanced HSV-1 and RSV replication in host cells. Furthermore, we identifies that ANKRD22 specifically interacts with STING, a critical protein function in multiple antiviral innate immune pathways. ANKRD22 by itself can only slightly induce type I IFNs IFN-α and IFN-β, and can’t induce type III IFN IL-29. However, it significantly synergizes STING-induced both type I and type III interferon production. Collectively, our studies indicate that ANKRD22 plays an important role for host defense against both DNA and RNA viruses by optimizing STING’s function on inducing type I and type III IFNs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.236
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2016
Admission routes1
Has abstractyes

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