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A staphylococcal superantigen unexpectedly augments the response magnitude of cognate anti-influenza CD8+ T cells in mice and humans.

2017· article· en· W4313382039 on OpenAlexaff
Courtney Meilleur, Arash Memarnejadian, John K. McCormick, S. M. Mansour Haeryfar

Bibliographic record

VenueThe Journal of Immunology · 2017
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune responses and vaccinations
Canadian institutionsWestern University
Fundersnot available
KeywordsSuperantigenBiologyImmunologyInfluenza A virusContext (archaeology)CD8Cytotoxic T cellT cellVirusMicrobiologyVirologyImmune systemIn vitroGenetics

Abstract

fetched live from OpenAlex

Abstract Staphylococcal enterotoxin B (SEB) is a bacterial superantigen (SAg) that induces proliferation and inflammatory cytokine secretion by up to 30% of T cells present in one’s repertoire. Eventually, the exposed T cells are thought to undergo activation-induced cell death or anergy, thus creating physical and/or functional holes in the repertoire. Using a mouse model of influenza A virus (IAV) vaccination, we found that primary IAV-specific CD8+ T cell (TCD8+) responses were enhanced, rather than diminished, in SEB-exposed animals. This effect was manifest for both local and systemic responses and validated when several different strains of IAV were utilized. Strikingly, the observed enhancement was easily detectable even one month post-SEB exposure, which was much later than the peak of the anti-IAV response. Importantly, IAV-specific TCD8+ in SEB-primed animals were not only capable of synthesizing interferon (IFN)-γ but also of lysing target cells pulsed with IAV-derived peptides in vivo. Finally, in vitro cultures of human peripheral blood mononuclear cells with SEB revealed that memory TCD8+, which recognize IAV but not Epstein-Barr virus or cytomegalovirus, were specifically expanded by this SAg and persisted long after deletion should have theoretically occurred. Taken together, our findings define a novel phenomenon in the context of TCD8+ responses to SAgs, which has important implications for vaccination against flu in critical care patients afflicted by staphylococcal infections and/or SAg-mediated illnesses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.282
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes1
Has abstractyes

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