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Synaptogyrin-2 Promotes Replication and Immune Evasion of A Novel Tick-borne Bunyavirus through Interacting with Viral Nonstructural Protein NSs

2016· article· en· W4313385606 on OpenAlexaff
Zheng Xing, Qiyu Sun, Xian Qi, Xiaodong Wu, Mifang Liang, Chuan Li, Carol J. Cardona

Bibliographic record

VenueThe Journal of Immunology · 2016
Typearticle
Languageen
FieldMedicine
TopicViral Infections and Vectors
Canadian institutionsCentre for Disability Prevention and Rehabilitation
Fundersnot available
KeywordsVirologyViral replicationBiologyViral proteinBunyaviridaeInterferonSevere fever with thrombocytopenia syndromeImmune systemPhlebovirusVirusImmunology

Abstract

fetched live from OpenAlex

Abstract Synaptogyrin-2 is a non-neuronal member of the synaptogyrin family involved in synaptic vesicle biogenesis and trafficking. Little has been known about the function of synaptogyrin-2. Severe Fever with Thrombocytopenia Syndrome (SFTS) is an emerging infectious disease characterized by high fever, thrombocytopenia, and leukocytopenia with a high fatality and caused by a novel tick-borne phlebovirus in the family Bunyaviridae. Our previous studies have shown that viral nonstructural protein NSs formed inclusion bodies (IBs) which are involved in viral immune evasion as well as in viral RNA replication. In this report, we sought to elucidate the mechanism how NSs formed the IBs, a lipid droplet-based structure confirmed by NSs co-localization with perilipin A and ADRP. We identified synaptogyrin-2 to be highly upregulated in response to SFTS bunyavirus (SFTSV) infection through a high throughput screening and be a promoter of viral replication. We demonstrated that synaptogyrin-2 interacted with NSs and was translocated into the IBs, which were reconstructed from lipid droplets into large structures in infection. Viral RNA replication decreased and infectious virus titers were lowered significantly when synaptogyrin-2 was silenced in specific shRNA-expressing cells, which was in parallel to the reduced number of the large IBs restructured from regular lipid droplets and increased antiviral interferon induction. We hypothesize that synaptogyrin-2 is essential to promoting the formation of the IBs, to be virus factories for viral RNA replication and immune evasion through its interaction with NSs. The findings unveiled the function of synaptogyrin-2 as an enhancer in viral infection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.290
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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