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Depth Encoding for Neonatal Patient Segmentation

2022· article· en· W4313527288 on OpenAlexafffund
Yasmina Souley Dosso, Kim Greenwood, JoAnn Harrold, James R. Green

Bibliographic record

Venue2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) · 2022
Typearticle
Languageen
FieldComputer Science
TopicAdvanced Neural Network Applications
Canadian institutionsChildren's Hospital of Eastern OntarioUniversity of OttawaCarleton University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsEncoding (memory)Computer scienceSegmentationComputer visionArtificial intelligenceImage segmentation

Abstract

fetched live from OpenAlex

Patient segmentation is an important step in neonatal monitoring for subsequent applications including vital sign monitoring, jaundice detection, or clonic seizure detection. Many studies have faced difficulty in obtaining clear delineation between the patient and the background, instead settling for segmentation of specific body parts, segmentation of visible skin only, or manual selection of regions of interest. The outline of the full body, however, provides a more holistic detection of the entire patient which can be useful for various applications. This study investigates whole-body semantic segmentation of patients under varying levels of coverage (unclothed, clothed, and partially covered with blankets), in complex scenes from the neonatal intensive care unit, from patients placed across all bed types (crib, incubator, and overhead warmer), and in different subject poses (supine, prone, and fetal position). To improve the patient-background delineation, several depth encoding and RGB-D fusion techniques are investigated with a Mask R-CNN model. This study demonstrates how depth information can effectively enhance the RGB image for neonatal patient segmentation, especially when the delineation is unclear due to patient coverage. While RGB images provided suitable predictions for optimal “clear” contours, RGB-D fusion images were required to achieve accurate patient segmentation in challenging “unclear” contours with over 71% IOU and over 82% Dice metrics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.935
Threshold uncertainty score0.515

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.052
GPT teacher head0.310
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes2
Has abstractyes

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