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Record W4313646006 · doi:10.1002/jmv.28474

Evaluating undercounts in epidemics: Response to Maruotti et al. (2022)

2023· letter· en· W4313646006 on OpenAlexaff
Michael Li, Jonathan Dushoff, David J. D. Earn, Benjamin M. Bolker

Bibliographic record

VenueJournal of Medical Virology · 2023
Typeletter
Languageen
FieldMathematics
TopicCOVID-19 epidemiological studies
Canadian institutionsMcMaster UniversityPublic Health Agency of Canada
Fundersnot available
KeywordsCompleteness (order theory)Sampling (signal processing)YesterdayIdentifierStatisticsComputer scienceMathematics

Abstract

fetched live from OpenAlex

Maruotti et al. 2022 used a mark-recapture approach to estimate bounds on the true number of monkeypox infections in various countries.We show that such approaches are fundamentally flawed.We argue on conceptual grounds that it is impossible to estimate undercounting based solely on a single stream of reported cases, supporting our contention by applying the authors' method to simulated epidemics.The simulations show that the proposed methods estimate bounds on the ascertainment ratio of ≈ 0.2 -0.5 roughly independently of the true ascertainment ratio.We conclude that the proposed mark-recapture approach should not be used to estimate undercounting or ascertainment ratios.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.093
metaresearch head score (Gemma)0.356
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.093
Threshold uncertainty score0.494

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0930.356
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0040.003
Science and technology studies0.0030.003
Scholarly communication0.0050.006
Open science0.0050.005
Research integrity0.0120.010
Insufficient payload (model declined to judge)0.0160.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.471
GPT teacher head0.564
Teacher spread0.092 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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