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Quantifying Uncertainty in Automated Detection of Alzheimer’s Patients Using Deep Neural Network

2023· preprint· en· W4313825903 on OpenAlexaff
Mohamad Roshanzamir, Afshar Shamsi, Hamzeh Asgharnezhad, Roohallah Alizadehsani, Sadiq Hussain, Hossein Moosaei, Arash Mohammadi, U. Rajendra Acharya, Hamid Alinejad

Bibliographic record

VenuePreprints.org · 2023
Typepreprint
Languageen
FieldNeuroscience
TopicBrain Tumor Detection and Classification
Canadian institutionsConcordia University
Fundersnot available
KeywordsComputer scienceDropout (neural networks)Artificial intelligenceDeep learningMachine learningDeep neural networksDementiaArtificial neural networkBayesian optimizationBayesian probabilityMonte Carlo methodStatisticsDisease

Abstract

fetched live from OpenAlex

One of the most common forms of dementia is Alzheimer’s disease (AD), which leads to progressive mental deterioration. Unfortunately, there is no definitive diagnosis and cure that can stop the condition progressing. The diagnosis is often performed based on the clinical history and neuropsychological data, including magnetic resonance imaging (MRI). Deep neural networks (DNN) algorithms are gaining popularity for medical diagnosis, and have been used widely for the analysis of MRI data. DNNs can extract hidden features from thousands of training images automatically. However, they cannot judge how confident they are about their predictions. To use DNNs in safety-critical applications such as medical diagnosis, uncertainty quantification of DNNs predictions is crucial. For this purpose, Monte Carlo dropout (MCD) has been widely used, however, it may lead to overconfident and miss calibrated results. This paper proposes a framework in which the MCD algorithm’s hyper-parameters are optimized during training using Bayesian optimization for the first time. The conducted optimization leads to assigning high predictive entropy to erroneous predictions and making it possible to recognize risky predictions. The proposed framework is used for AD diagnosis, which has not been done before. We compare our method with some existing methods in the literature based on different uncertainty quantification criteria. The results of comprehensive experiments on the Kaggle dataset using a deep model pre-trained on the ImageNet dataset show that the proposed algorithm can quantify uncertainty much better than the existing methods.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.202
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.356
GPT teacher head0.394
Teacher spread0.038 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2023
Admission routes1
Has abstractyes

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