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Record W4318472573 · doi:10.37867/te1401141

GENOME-WIDE IDENTIFICATION OF NICOTIANA TABACUM MIRNAS AND THEIR ROLE IN HUMAN HEALTH – A COMPUTATIONAL GENOMICS ASSESSMENT

2022· article· en· W4318472573 on OpenAlexaff
Mansi Bhavsar, Naman Mangukia, Toral Manvar, Archana Mankad

Bibliographic record

VenueTowards Excellence · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCRISPR and Genetic Engineering
Canadian institutionsImpact
Fundersnot available
KeywordsNicotiana tabacumGenomeBiologymicroRNAIdentification (biology)GenomicsComputational biologyBiotechnologyGeneticsBotanyGene

Abstract

fetched live from OpenAlex

Tobacco kills their half of the consumers still, grown as the most lucrative crop worldwide for different uses like chewing, smoking, and snuffing. On the other side, it was known as a chief medicinal plant by Native Americans, ancient European, Amazonian and Indian. In the middle 20th century tobacco was declared a negative and hazardous plant because of its nicotine component. Nicotiana tabacum (N. tabacum) is well studied in plant biotechnology and studied as a model plant. Likewise. N. tabacum miRNAs were also identified a decade ago however a genome-wide computational approach to identify miRNAs remained to be explored. These XenomiRs and their cross-species talk were also revealed for the first time in the current study. The top ten hub nodes (CCNE1, DDX5, NEUROD1, SOS1, CUL2, OPHN1, SOX9, KCNA1, FBXW2, and NOC3L) were retrieved from the experiment which gives evidence of tobacco miRNAs and their involvement in diseases like carcinoma and neurodevelopmental disorders.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.778
Threshold uncertainty score0.370

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.297
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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