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Record W4318678689 · doi:10.1101/2023.01.30.523509

Normative Modeling of Brain Morphometry Across the Lifespan Using CentileBrain: Algorithm Benchmarking and Model Optimization

2023· preprint· en· W4318678689 on OpenAlexafffund
Ruiyang Ge, Yuetong Yu, Yi Xuan Qi, Yunan Vera Fan, Shiyu Chen, Chuntong Gao, Shalaila S. Haas, Amirhossein Modabbernia, Faye New, Ingrid Agartz, Philip Asherson, Rosa Ayesa‐Arriola, Nerisa Banaj, Tobias Banaschewski, Sarah Baumeister, Alessandro Bertolino, Dorret I. Boomsma, Stefan Borgwardt, Josiane Bourque, Daniel Brandeis, Alan Breier, Henry Brodaty, Rachel M. Brouwer, Randy L. Buckner, Jan K. Buitelaar, Dara M. Cannon, Xavier Caseras, Simon Červenka, Patricia Conrod, Benedicto Crespo‐Facorro, Fabrice Crivello, Eveline A. Crone, Greig I. de Zubicaray, Annabella Di Giorgio, Susanne Erk, Simon E. Fisher, Barbara Franke, Thomas Frodl, David C. Glahn, Dominik Grotegerd, Oliver Gruber, Patricia Gruner, Raquel E. Gur, Ruben C. Gur, Ben J. Harrison, Sean N. Hatton, Ian B. Hickie, Fleur M. Howells, Hilleke E. Hulshoff Pol, Chaim Huyser, Terry L. Jernigan, Jiyang Jiang, John A. Joska, René S. Kahn, Nicole A. Kochan, Sanne Koops, Jonna Kuntsi, Jim Lagopoulos, Luisa Lázaro, И. С. Лебедева, Christine Löchner, Nicholas G. Martin, Bernard Mazoyer, Brenna C. McDonald, Colm McDonald, Katie L. McMahon, Tomohiro Nakao, Lars Nyberg, Fabrizio Piras, Marı́a J. Portella, Jiang Qiu, Joshua L. Roffman, Perminder S. Sachdev, Nicole Sanford, Theodore D. Satterthwaite, Andrew J. Saykin, Gunter Schumann, Carl M. Sellgren, Kang Sim, Jordan W. Smoller, Jair C. Soares, Iris E. Sommer, Gianfranco Spalletta, Dan J. Stein, Christian K. Tamnes, Sophia I Thomopolous, A. S. Tomyshev, Diana Tordesillas‐Gutiérrez, Julian N. Trollor, Dennis van ‘t Ent, Odile A. van den Heuvel, Theo G.M. van Erp, Neeltje EM van Haren, Daniela Vecchio, Dick J. Veltman, Henrik Walter, Yang Wang, Bernd Weber, Dongtao Wei, Wei Wen, Lars T. Westlye, Lara M. Wierenga, Steven Williams, Margaret J. Wright, Sarah E. Medland, Mon-Ju Wu, Kevin Yu, Neda Jahanshad, Paul M. Thompson, Sophia Frangou

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsUniversité de MontréalUniversity of British Columbia
FundersUniversity of British ColumbiaRadboud UniversiteitNational Center for Advancing Translational SciencesIcahn School of Medicine at Mount Sinai
KeywordsCovariateNeuroimagingNormativeMultivariate statisticsPolynomialRegressionArtificial intelligencePsychologyComputer scienceMathematicsStatisticsNeuroscience

Abstract

fetched live from OpenAlex

We present an empirically benchmarked framework for sex-specific normative modeling of brain morphometry that can inform about the biological and behavioral significance of deviations from typical age-related neuroanatomical changes and support future study designs. This framework was developed using regional morphometric data from 37,407 healthy individuals (53% female; aged 3-90 years) following a comparative evaluation of eight algorithms and multiple covariate combinations pertaining to image acquisition and quality, parcellation software versions, global neuroimaging measures, and longitudinal stability. The Multivariate Factorial Polynomial Regression (MFPR) emerged as the preferred algorithm optimized using nonlinear polynomials for age and linear effects of global measures as covariates. The MFPR models showed excellent accuracy across the lifespan and within distinct age-bins, and longitudinal stability over a 2-year period. The performance of all MFPR models plateaued at sample sizes exceeding 3,000 study participants. The model and scripts described here are freely available through CentileBrain (https://centilebrain.org/).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.008
metaresearch head score (Gemma)0.025
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.013
Threshold uncertainty score0.042

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0080.025
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0030.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.269
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2023
Admission routes2
Has abstractyes

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