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Record W4319773267 · doi:10.26434/chemrxiv-2023-hswx6

A local Gaussian Processes method for fittingpotential surfaces that obviates the need to invertlarge matrices

2023· preprint· en· W4319773267 on OpenAlexafffund
Tucker Carrington, Nuoyan Yang, Spencer Hill, Sergei Manzhos

Bibliographic record

VenueChemRxiv · 2023
Typepreprint
Languageen
FieldChemistry
TopicChemical Thermodynamics and Molecular Structure
Canadian institutionsQueen's University
FundersNatural Sciences and Engineering Research Council of CanadaUniversité de Reims Champagne-Ardenne
KeywordsInterpolation (computer graphics)Potential energyGaussian processGaussianKrigingPotential energy surfaceMathematicsSuperposition principleMatrix (chemical analysis)Determinantal point processRandom matrixApplied mathematicsMathematical analysisComputer scienceAb initioPhysicsQuantum mechanicsStatistics

Abstract

fetched live from OpenAlex

In order to compute a vibrational spectrum, one often wishes to start with a set of ab initio Born-Oppenheimer potential values at points, called fitting points, and interpolate or fit to find values of the potential at quadrature or collocation points. It is common to do this once to build a potential energy surface (PES). Once the PES is known, it can be evaluated at any point in configuration space. Gaussian Process (GP) is frequently being used to make a PES. As is the case in other interpolation methods, to use GP one must store and invert a matrix whose size is the number of fitting points. The matrix is sometimes large enough that approximations are introduced to reduce the cost of the calculation. We show that is possible to use many local Gaussian Process fits rather than one global fit. Retaining only local Gaussians and the associated points works well despite the fact that other Gaussians have tails with significant amplitude in the local region. We demonstrate that from the potential values obtained from the local fits it is possible to compute accurate energy levels of formaldehyde. In one calculation, potential values were obtained with N = 120, 000 fitting points by inverting matrices of size less than m = 400. The local idea reduces the cost from N^3 to T(m3 + N), where T is the number of desired potential points.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.180
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.287
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

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