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Vertical niche partitioning of life histories in a tropical forest

2023· preprint· en· W4320485350 on OpenAlexaff
John M. Grady, Quentin D. Read, Sydne Record, Nadja Rüger, Phoebe L. Zarnetske, Anthony I. Dell, Stephen P. Hubbell, Sean T. Michaletz, Brian J. Enquist

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsUniversity of British Columbia
FundersDivision of Emerging FrontiersDivision of Biological InfrastructureCollege of Engineering, Michigan State UniversityMichigan State UniversityNational Socio-Environmental Synthesis CenterDeutsche ForschungsgemeinschaftDeutsches Zentrum für integrative Biodiversitätsforschung Halle-Jena-LeipzigNational Science Foundation
KeywordsUnderstorySpecies richnessNicheNiche differentiationEcologyCanopyAbundance (ecology)Old-growth forestEcosystemTropicsTropical and subtropical dry broadleaf forestsBiologyGeographyAgroforestry

Abstract

fetched live from OpenAlex

Life history variation in trees is a ubiquitous feature of tropical forests that may facilitate the niche partitioning of light. However, many tests have failed to detect light partitioning by saplings in gaps, which may reflect the stochastic nature of understory light penetration and recruitment. We argue that tree size is a critical component of niche partitioning that is more tightly linked to light availability. To account for size, we use a scaling framework to assess patterns of growth, abundance, mortality, and richness across life histories from >114,000 trees in a primary, neotropical forest. Relative abundance, productivity, and richness shift ~1−2 orders of magnitude with tree size: from shade tolerant, slow trees dominating the understory to parity with rapidly growing fast and long-lived pioneer species in the canopy. Life history tradeoffs promote vertical niche partitioning in tropical forests.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.258
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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