MétaCan
Menu
Back to cohort
Record W4322624408 · doi:10.1371/journal.pbio.3001991

The EDGE2 protocol: Advancing the prioritisation of Evolutionarily Distinct and Globally Endangered species for practical conservation action

2023· article· en· W4322624408 on OpenAlexaff
Rikki Gumbs, Claudia L. Gray, Monika Böhm, Ian J. Burfield, Olivia Couchman, Daniel P. Faith, Félix Forest, Michael Hoffmann, Nick J. B. Isaac, Walter Jetz, Georgina M. Mace, Arne Ø. Mooers, Kamran Safi, Oenone Scott, Mike Steel, Caroline M. Tucker, William D. Pearse, Nisha Owen, James Rosindell

Bibliographic record

VenuePLoS Biology · 2023
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsSimon Fraser University
FundersNatural Environment Research CouncilImperial College LondonZoological Society of London
KeywordsBiologyEndangered speciesAction (physics)Evolutionary biologyConservation scienceEcologyComputational biologyBiodiversityHabitat

Abstract

fetched live from OpenAlex

The conservation of evolutionary history has been linked to increased benefits for humanity and can be captured by phylogenetic diversity (PD). The Evolutionarily Distinct and Globally Endangered (EDGE) metric has, since 2007, been used to prioritise threatened species for practical conservation that embody large amounts of evolutionary history. While there have been important research advances since 2007, they have not been adopted in practice because of a lack of consensus in the conservation community. Here, building from an interdisciplinary workshop to update the existing EDGE approach, we present an "EDGE2" protocol that draws on a decade of research and innovation to develop an improved, consistent methodology for prioritising species conservation efforts. Key advances include methods for dealing with uncertainty and accounting for the extinction risk of closely related species. We describe EDGE2 in terms of distinct components to facilitate future revisions to its constituent parts without needing to reconsider the whole. We illustrate EDGE2 by applying it to the world's mammals. As we approach a crossroads for global biodiversity policy, this Consensus View shows how collaboration between academic and applied conservation biologists can guide effective and practical priority-setting to conserve biodiversity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.122
metaresearch head score (Gemma)0.194
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Protocol · Consensus signal: none
Teacher disagreement score0.122
Threshold uncertainty score0.644

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1220.194
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0060.004
Science and technology studies0.0040.004
Scholarly communication0.0070.007
Open science0.0060.012
Research integrity0.0070.008
Insufficient payload (model declined to judge)0.0510.026

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.086
GPT teacher head0.344
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations106
Published2023
Admission routes1
Has abstractyes

Explore more

Same venuePLoS BiologySame topicSpecies Distribution and Climate ChangeFrench-language works237,207