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Record W4322730804 · doi:10.1093/biosci/biac108

Approaches to Forecasting Damage by Invasive Forest Insects and Pathogens: A Cross-Assessment

2023· article· en· W4322730804 on OpenAlexaff
Kenneth F. Raffa, Eckehard G. Brockerhoff, Jean‐Claude Grégoire, Richard C. Hamelin, Andrew M. Liebhold, Alberto Santini, Robert C. Venette, Michael J. Wingfield

Bibliographic record

VenueBioScience · 2023
Typearticle
Languageen
FieldEnvironmental Science
TopicForest Insect Ecology and Management
Canadian institutionsUniversity of British Columbia
FundersUniversity of PretoriaHorizon 2020 Framework ProgrammeColgate UniversityNational Research FoundationEuropean CommissionUniversity of Wisconsin-Madison
KeywordsInvasive speciesEcosystemEcosystem servicesEcologyEnvironmental resource managementBiologyIntroduced speciesIdentification (biology)Risk analysis (engineering)Computer scienceEnvironmental scienceBusiness

Abstract

fetched live from OpenAlex

Abstract Nonnative insects and pathogens pose major threats to forest ecosystems worldwide, greatly diminishing the ecosystem services trees provide. Given the high global diversity of arthropod and microbial species, their often unknown biological features or even identities, and their ease of accidental transport, there is an urgent need to better forecast the most likely species to cause damage. Several risk assessment approaches have been proposed or implemented to guide preventative measures. However, the underlying assumptions of each approach have rarely been explicitly identified or critically evaluated. We propose that evaluating the implicit assumptions, optimal usages, and advantages and limitations of each approach could help improve their combined utility. We consider four general categories: using prior pest status in native and previously invaded regions; evaluating statistical patterns of traits and gene sequences associated with a high impact; sentinel and other plantings to expose trees to insects and pathogens in native, nonnative, or experimental settings; and laboratory assays using detached plant parts or seedlings under controlled conditions. We evaluate how and under what conditions the assumptions of each approach are best met and propose methods for integrating multiple approaches to improve our forecasting ability and prevent losses from invasive pests.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.016
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.013
Threshold uncertainty score0.068

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.016
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.001
Science and technology studies0.0010.001
Scholarly communication0.0020.003
Open science0.0010.003
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.091
GPT teacher head0.260
Teacher spread0.169 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2023
Admission routes1
Has abstractyes

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