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Use of diagnostics for serosurveillance studies in pregnant individuals during the SARS-CoV-2 pandemic

2023· preprint· en· W4323360630 on OpenAlexaff
Naomi Whyler, Marziya Kadir, Stella Meimei Ho, Joanne Said M, Helen Megow, Kirsten R. Palmer, Sushena Krishnaswamy, Suellen Nicholson, Megan Wieringa, Tony M. Korman, Michelle Giles

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldMedicine
TopicCOVID-19 Impact on Reproduction
Canadian institutionsCasey House
Fundersnot available
KeywordsSeroprevalenceMedicineAsymptomaticSerologyContact tracingPandemicPregnancyDiseaseSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Public healthCoronavirus disease 2019 (COVID-19)AntibodyImmunologyInternal medicineInfectious disease (medical specialty)PathologyBiology

Abstract

fetched live from OpenAlex

Pregnant individuals are known to be at increased risk of worse outcomes from COVID-19 infection. Recent data suggests that they are also more likely to exhibit milder symptoms and have higher rates of asymptomatic infection. The health impacts of milder disease are less well-described but may include adverse perinatal outcomes. Serosurveillance can help describe accurately background rates of seropositivity in populations with high rates of asymptomatic infection. The seroprevalence of SARS-CoV-2 infection prior to vaccine availability was assessed in two large maternity centres. Of 437 pregnant individuals, seven were positive on initial screening, with one false positive identified on subsequent confirmatory testing. An overall seropositivity rate of 1.4% was found. No adverse pregnancy outcomes were identified. Confirmatory testing was performed with four commercial antibody-based assays and an in-house microneutralisation assay. Wantai SARS-CoV-2 receptor-binding-domain total antibody performed best, similar to previous reports. Serological surveillance can estimate infection rates not captured by acute PCR testing, and may assist with contact tracing, estimation of immunity rates and inform public health policy in at-risk groups. Evaluation of serological assays should be integrated into serosurveillance initiatives.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.020
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.057

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.020
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.389
GPT teacher head0.455
Teacher spread0.067 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2023
Admission routes1
Has abstractyes

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