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Record W4327564976 · doi:10.1117/12.2650201

Label-free automated whole slide imaging system for histopathological assessment of tissue with total absorption photoacoustic remote sensing (Conference Presentation)

2023· article· en· W4327564976 on OpenAlexaff
James Tweel, Benjamin R. Ecclestone, Marian Boktor, Kevan Bell, Parsin Haji Reza

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEngineering
TopicPhotoacoustic and Ultrasonic Imaging
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsPhotoacoustic imaging in biomedicineAbsorption (acoustics)Biomedical engineeringBiomoleculeRadiative transferMaterials scienceBiological tissueComputer scienceOpticsNanotechnologyMedicinePhysics

Abstract

fetched live from OpenAlex

Histological analysis is crucial for the diagnosis of a wide variety of diseases. However, labelling of thin tissue sections can alter tissue chemistry and is greatly influenced by pre-analytic variables. Furthermore, biopsies provide a limited number of tissue sections and thus stains must be used sparingly. Total Absorption Photoacoustic Remote Sensing (TA-PARS) is an all-optical and label-free technique capable of capturing both radiative and non-radiative endogenous contrasts in cells, tissues and biomolecules. Here we present an automated full-slide TA-PARS scanning system capable of providing label-free virtually stained whole slide images with sufficient resolution (~300nm) to recover subcellular diagnostic characteristics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.023
Threshold uncertainty score0.076

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0230.010

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.272
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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