Multiple endemic disease risk modeling using a Bayesian spatiotemporal shared components model
Bibliographic record
Abstract
Traditionally, endemic diseases such as dengue, diarrhea, and tuberculosis are modeled separately, which leads to a limited understanding of current disease dynamics and an inaccurate evaluation of the parameters of the different models. In this study, we propose a joint spatiotemporal model to predict the risks of multiple endemic diseases and identify hotspots. The model includes spatial shared component random effects and a covariate for healthy behavior. The model was applied to the joint modeling of dengue, diarrhea, and tuberculosis in thirty districts in Bandung, Indonesia over a five-year period. Our findings show that the joint model was effective in understanding the characteristics of the diseases. One potential advantage of using shared component models is that they can identify diseases with spatial or temporal distribution patterns and consider shared risk factors that may be spatially correlated, such as climate. It is recommended to conduct exploratory analyses to determine the correlation between the risks of the diseases being studied and the reference disease before using this type of model.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.004 | 0.008 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.002 |
| Bibliometrics | 0.002 | 0.002 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.002 | 0.002 |
| Open science | 0.003 | 0.001 |
| Research integrity | 0.001 | 0.002 |
| Insufficient payload (model declined to judge) | 0.002 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".