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Record W4361274698 · doi:10.55163/egcn8815

Biosecurity Risk Assessment in the Life Sciences: Towards a Toolkit for Individual Practitioners

2023· report· en· W4361274698 on OpenAlexfundno aff
Mirko Himmel

Bibliographic record

Venuenot available
Typereport
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacillus and Francisella bacterial research
Canadian institutionsnot available
FundersForeign, Commonwealth and Development OfficePublic Health AgencyPublic Health Agency of Canada
KeywordsBiosecurityBiosafetyRisk managementProcess (computing)Work (physics)Risk analysis (engineering)Intersection (aeronautics)Unintended consequencesRisk assessmentKnowledge managementBusinessManagement scienceEngineeringComputer scienceEngineering ethicsPolitical scienceComputer securityMedicine

Abstract

fetched live from OpenAlex

There are a number of potential risks and unintended consequences associated with research at the intersection of biological sciences and emerging technologies, including the risk of misuse for malicious purposes. While there are established biorisk management approaches to dealing with these dangers, gaps remain. This paper focuses on the role of individual practitioners in contributing to a larger culture of biosafety and biosecurity. It presents a proposed toolkit that involves a risk assessment process and strategies to manage potential risks. The paper outlines ways to motivate practitioners to proactively take responsibility for considering and managing the biorisks associated with their work, aiming to close the knowledge gap by equipping scientists with appropriate tools to implement a comprehensive biorisk mitigation strategy at the practical level. It concludes by deploying the approach using a potential application from nanobiotechnology for demonstration purposes and considers next steps.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.138
metaresearch head score (Gemma)0.098
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.138
Threshold uncertainty score0.728

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1380.098
Meta-epidemiology (narrow)0.0020.003
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0050.002
Science and technology studies0.0080.013
Scholarly communication0.0200.024
Open science0.0080.038
Research integrity0.0160.018
Insufficient payload (model declined to judge)0.0070.009

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.164
GPT teacher head0.437
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes1
Has abstractyes

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Same topicBacillus and Francisella bacterial researchFrench-language works237,207