MétaCan
Menu
Back to cohort
Record W4366082712 · doi:10.1109/jbhi.2023.3267857

Deep Learning Segmentation of the Right Ventricle in Cardiac MRI: The M&Ms Challenge

2023· article· en· W4366082712 on OpenAlexaff
Carlos Martín-Isla, Víctor M. Campello, Cristian Izquierdo, Kaisar Kushibar, Carla Sendra-Balcells, Polyxeni Gkontra, Alireza Sojoudi, Mitchell J. Fulton, Tewodros Weldebirhan Arega, Kumaradevan Punithakumar, Lei Li, Xiaowu Sun, Yasmina Al Khalil, Di Liu, Sana Jabbar, Sandro Queirós, Francesco Galati, Moona Mazher, Zheyao Gao, Marcel Beetz, Lennart Tautz, Christoforos Galazis, Marta Varela, Markus Hüllebrand, Vicente Grau, Xiahai Zhuang, Domènec Puig, María A. Zuluaga, Hassan Mohy‐ud‐Din, Dimitris Metaxas, Marcel Breeuwer, Rob J. van der Geest, Michelle Noga, Stéphanie Bricq, Mark E. Rentschler, Andrea Guala, Steffen E. Petersen, Sérgio Escalera, José F. Rodríguez‐Palomares, Karim Lekadir

Bibliographic record

VenueIEEE Journal of Biomedical and Health Informatics · 2023
Typearticle
Languageen
FieldMedicine
TopicCardiac Valve Diseases and Treatments
Canadian institutionsCanadian VIGOUR CentreUniversity of AlbertaCircle Cardiovascular Imaging
FundersFundação para a Ciência e a TecnologiaHorizon 2020 Framework ProgrammeFundación Bancaria Caixa d'Estalvis i Pensions de BarcelonaMinisterio de Economía y CompetitividadInstitució Catalana de Recerca i Estudis AvançatsMinisterio de Ciencia, Innovación y Universidades
KeywordsSegmentationVentricleArtificial intelligenceDeep learningMedicineComputer scienceCardiac VentricleCardiology

Abstract

fetched live from OpenAlex

In recent years, several deep learning models have been proposed to accurately quantify and diagnose cardiac pathologies. These automated tools heavily rely on the accurate segmentation of cardiac structures in MRI images. However, segmentation of the right ventricle is challenging due to its highly complex shape and ill-defined borders. Hence, there is a need for new methods to handle such structure's geometrical and textural complexities, notably in the presence of pathologies such as Dilated Right Ventricle, Tricuspid Regurgitation, Arrhythmogenesis, Tetralogy of Fallot, and Inter-atrial Communication. The last MICCAI challenge on right ventricle segmentation was held in 2012 and included only 48 cases from a single clinical center. As part of the 12th Workshop on Statistical Atlases and Computational Models of the Heart (STACOM 2021), the M&Ms-2 challenge was organized to promote the interest of the research community around right ventricle segmentation in multi-disease, multi-view, and multi-center cardiac MRI. Three hundred sixty CMR cases, including short-axis and long-axis 4-chamber views, were collected from three Spanish hospitals using nine different scanners from three different vendors, and included a diverse set of right and left ventricle pathologies. The solutions provided by the participants show that nnU-Net achieved the best results overall. However, multi-view approaches were able to capture additional information, highlighting the need to integrate multiple cardiac diseases, views, scanners, and acquisition protocols to produce reliable automatic cardiac segmentation algorithms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.006
Threshold uncertainty score0.021

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.008
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0020.002
Research integrity0.0040.002
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.369
Teacher spread0.339 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations72
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueIEEE Journal of Biomedical and Health InformaticsSame topicCardiac Valve Diseases and TreatmentsFrench-language works237,207