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Record W4367395140 · doi:10.1101/2023.04.28.538719

Microbes as part of ancestral neuronal circuits: Bacterial produced signals affect neurons controlling eating behavior in <i>Hydra</i>

2023· preprint· en· W4367395140 on OpenAlexfundno aff
Christoph Giez, Denis Pinkle, Yan Giencke, Jörg Wittlieb, Eva Herbst, Tobias Spratte, Tim Lachnit, Alexander Klimovich, Christine Selhuber‐Unkel, Thomas C. G. Bosch

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldEarth and Planetary Sciences
TopicMarine Invertebrate Physiology and Ecology
Canadian institutionsnot available
FundersDeutsche ForschungsgemeinschaftCanadian Institute for Advanced Research
KeywordsBiologyLernaean HydraNeuroscienceCentral nervous systemBiological neural networkFeeding behaviorNervous systemGlutamate receptorAffect (linguistics)Gut floraNerve netNeuronal circuitsCalcium imagingMicrobiomeCell biologyImmunologyPsychologyZoologyGeneticsCommunicationReceptorInternal medicineCalcium

Abstract

fetched live from OpenAlex

Summary Although recent studies indicate the impact of microbes on the central nervous systems and behavior, it remains unclear how the relationship between the functionality of the nervous system, behavior and the microbiota arise. We studied the eating behavior of Hydra, a host that has a simple nervous system and a low-complexity microbiota. To identify the neuronal subpopulations involved, we used a subpopulation specific cell ablation system and calcium imaging. The role of the microbiota was uncovered by reducing the diversity of the natural microbiota. Here, we demonstrate that different neuronal subpopulations are functioning together to control the eating behavior. The microbiota participates in control of the eating behavior since germ-free or mono-colonized animals have drastic difficulties in mouth opening. This was restored by adding a full complement of the microbiota. In summary, we provide a mechanistic explanation of how the eating behavior is controlled in Hydra and how microbes can affect the neuronal circuit. Highlights - Multiple neuronal modules and their networks control complex behavior in an animal lacking a central nervous system. - Its associated microbes participate in these neuronal circuits and influence the eating behavior. - Disorganization of the microbiota negatively impacts this eating behavior. - Glutamate participates in an evolutionary ancient interkingdom language.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.223
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes1
Has abstractyes

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