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Record W4377098967 · doi:10.1080/07060661.2023.2215212

Applications of genome editing in plant virus disease management: CRISPR/Cas9 plays a central role

2023· article· en· W4377098967 on OpenAlexvenueno aff
Farhana Wani, Shahjahan Rashid, Sumiah Wani, Sahar Saleem, Sanober Bhat, Ebru Derelli Tüfekçi, Ayman El Sabagh, Shabir Hussain Wani, Aflaq Hamid

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Virus Research Studies
Canadian institutionsnot available
FundersScience and Engineering Research BoardBoettcher Foundation
KeywordsCRISPRGenome editingGenomeBiologyCas9Computational biologyGeneticsGene

Abstract

fetched live from OpenAlex

Plant viruses infect a wide variety of economically important crop plants and cause significant loss in agricultural production around the world. Conventional control strategies are insufficient to combat rapidly evolving plant viruses. In recent years, genome editing technologies have paved new ways for manipulating viral genomes (DNA or RNA). Among them, the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) and CRISPR-associated protein 9 (Cas9) system has been seen to be able to engineer plant virus resistance by directly targeting the viral genome as well as by inactivating host susceptibility genes. In this review, we survey genome editing tools targeting viral genomes, with an emphasis on CRISPR/Cas9. The advantages of the CRISPR/Cas9 system for combating plant viruses as well as its limitations are discussed in detail.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.233
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of Plant PathologySame topicPlant Virus Research StudiesFrench-language works237,207