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Record W4378228851 · doi:10.1101/2023.05.24.541105

Urbanisation generates multiple trait syndromes for terrestrial taxa worldwide

2023· preprint· en· W4378228851 on OpenAlexaff
Amy K. Hahs, Bertrand Fournier, Myla F. J. Aronson, Charles H. Nilon, Adriana Herrera-Montes, Allyson B. Salisbury, Caragh G. Threlfall, Christine C. Rega‐Brodsky, Christopher A. Lepczyk, Frank A. La Sorte, Ian MacGregor‐Fors, J. Scott MacIvor, Kirsten Jung, Max R. Piana, Nicholas S. G. Williams, Sonja Knapp, Alan Vergnes, Aldemar A. Acevedo, Alison M. Gainsbury, Ana Rainho, Andrew J. Hamer, Assaf Shwartz, Christian C. Voigt, Daniel Lewanzik, David M. Lowenstein, David O’Brien, Désirée Tommasi, Eduardo Pineda, Ela Sita Carpenter, Elena Belskaya, Gábor L. Löveï, James C. Makinson, Jennifer Castañeda-Oviedo, Joanna L. Coleman, Jon P. Sadler, Jordan Shroyer, Julie Teresa Shapiro, Katherine C. R. Baldock, Kelly Ksiazek‐Mikenas, Kevin C. Matteson, Kyle Barrett, Lizette Siles, Luís F. Aguirre, Luis Orlando Armesto, Marcin Zalewski, María Isabel Herrera-Montes, Martin К. Obrist, Rebecca K. Tonietto, Ricardo Torrado, Sara A. Gagné, Sarah J. Hinners, Tanya Latty, Thilina D. Surasinghe, Thomas Sattler, Werner Ulrich, Tibor Magura, Zoltán Elek, D. Johan Kotze, Marco Moretti

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicPlant and animal studies
Canadian institutionsUniversity of Toronto
FundersNational Science Foundation
KeywordsTraitTaxonUrbanizationEcologyBiodiversityAbundance (ecology)BiologyHabitatGeographySpatial ecologyRange (aeronautics)

Abstract

fetched live from OpenAlex

Cities can host significant biological diversity. Yet, urbanisation leads to the loss of habitats and, potentially, to local extinctions. Understanding how multiple taxa respond to urbanisation globally is essential to promote and conserve biodiversity in cities and surrounding landscapes. Using a dataset with site-level occurrence and trait data of 5302 species from six terrestrial fauna taxonomic groups across 379 cities on 6 continents, we show that urbanisation produces taxon-specific changes in trait composition, with traits related to reproductive strategy consistently showing the strongest response. The effect of urbanisation on community trait composition is strongest at the largest spatial scale considered, and more closely linked to landscape composition (% urban) than arrangement (aggregation), although latitude and climatic variables remain a stronger influence. This study did not find evidence in support of a global urban taxa syndrome, but instead we suggest that there are four general urban trait syndromes, with resources associated with reproduction and diet likely to be driving patterns in traits associated with mobility and body size. Functional diversity measures showed a wide range of responses, leading to a shift in trait space that is most likely driven by the distribution and abundance of critical resources, and the urban trait syndrome displayed by individual species within a community. Further research is required to understand the interactions between the four general urban trait syndromes, resource distribution and abundance and changes in functional diversity of taxa at different spatial and temporal scales. Maximising opportunities to support species within taxa groups with different urban trait syndromes should be pivotal in conservation and management programmes within and among cities. This will reduce the likelihood of biotic homogenisation at the taxa level, and helps ensure that urban environments have the ecological capacity to respond to challenges such as climate change, further habitat fragmentation and loss, and other disruptions. These actions are critical if we are to reframe the role of cities in global biodiversity loss.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.002
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.074
GPT teacher head0.224
Teacher spread0.150 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

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