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Record W4378715403 · doi:10.1038/s41588-023-01410-1

Genome-wide association meta-analysis of spontaneous coronary artery dissection identifies risk variants and genes related to artery integrity and tissue-mediated coagulation

2023· review· en· W4378715403 on OpenAlexafffund
David Adlam, Takiy-Eddine Berrandou, Adrien Georges, Christopher P. Nelson, Eleni Giannoulatou, Joséphine Henry, Lijiang Ma, Montgomery Blencowe, Tamiel N. Turley, Min‐Lee Yang, Sandesh Chopade, Chris Finan, Peter S. Braund, Inès Sadeg-Sayoud, Siiri E. Iismaa, Matthew Kosel, Xiang Zhou, Stephen E. Hamby, Jenny Cheng, Lu Liu, Ingrid Tarr, David W.M. Muller, Valentina d’Escamard, Annette King, Liam R. Brunham, Ania A. Baranowska-Clarke, Stéphanie Debette, Philippe Amouyel, Jeffrey W. Olin, Snehal Patil, Stephanie Hesselson, Keerat Junday, Stavroula Kanoni, Krishna G. Aragam, Adam S. Butterworth, Mark K. Bakker, Ynte M. Ruigrok, Marysia S. Tweet, Rajiv Gulati, Nicolas Combaret, Daniella Kadian‐Dodov, Jonathan M. Kalman, Diane Fatkin, Aroon D. Hingorani, Jacqueline Saw, Tom R. Webb, Sharonne N. Hayes, Xia Yang, Santhi K. Ganesh, Timothy M. Olson, Jason C. Kovacic, Robert M. Graham, N. J. Samani, Nabila Bouatia‐Naji

Bibliographic record

VenueNature Genetics · 2023
Typereview
Languageen
FieldMedicine
TopicCardiovascular Issues in Pregnancy
Canadian institutionsVancouver General HospitalUniversity of British Columbia
FundersCommon FundNational Institute of Diabetes and Digestive and Kidney DiseasesNational Cancer InstituteNational Institute of Mental HealthNational Heart, Lung, and Blood InstituteEuropean Regional Development FundAstraZenecaNational Health and Medical Research CouncilNational Institutes of HealthU.S. Department of DefenseSociété Française de CardiologieMedical Research CouncilNSW Ministry of HealthFédération Française de CardiologieAgence Nationale de la RechercheNational Institute of General Medical SciencesCenter for Individualized Medicine, Mayo ClinicBritish Heart FoundationNational Institute for Health and Care ResearchNIH Office of the DirectorCardiac Society of Australia and New ZealandMichael Smith Health Research BCInstituto de Salud Carlos IIICentre Hospitalier Universitaire de Clermont-FerrandFONDATION ALZHEIMERA. Alfred Taubman Medical Research InstituteVictor Chang Cardiac Research InstituteUniversity of MichiganCanadian Institutes of Health ResearchAmerican Heart AssociationHeart and Stroke Foundation of Canada
KeywordsScadBiologyCoronary artery diseaseGenome-wide association studyMyocardial infarctionGenetic associationBioinformaticsGeneGeneticsInternal medicineSingle-nucleotide polymorphismMedicineGenotype

Abstract

fetched live from OpenAlex

Spontaneous coronary artery dissection (SCAD) is an understudied cause of myocardial infarction primarily affecting women. It is not known to what extent SCAD is genetically distinct from other cardiovascular diseases, including atherosclerotic coronary artery disease (CAD). Here we present a genome-wide association meta-analysis (1,917 cases and 9,292 controls) identifying 16 risk loci for SCAD. Integrative functional annotations prioritized genes that are likely to be regulated in vascular smooth muscle cells and artery fibroblasts and implicated in extracellular matrix biology. One locus containing the tissue factor gene F3, which is involved in blood coagulation cascade initiation, appears to be specific for SCAD risk. Several associated variants have diametrically opposite associations with CAD, suggesting that shared biological processes contribute to both diseases, but through different mechanisms. We also infer a causal role for high blood pressure in SCAD. Our findings provide novel pathophysiological insights involving arterial integrity and tissue-mediated coagulation in SCAD and set the stage for future specific therapeutics and preventions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Meta-analysis · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.004
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0040.004
Bibliometrics0.0020.003
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.330
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designMeta-analysis
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations89
Published2023
Admission routes2
Has abstractyes

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