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Record W4379163670 · doi:10.1667/rade-22-00207.1

RENEB Inter-Laboratory Comparison 2021: Inter-Assay Comparison of Eight Dosimetry Assays

2023· article· en· W4379163670 on OpenAlexaff
Matthias Port, Joan Francesc Barquinero, David Endesfelder, Jayne Moquet, Ursula Oestreicher, Georgia I. Terzoudi, F. Trompier, Anne Vral, Yoshihiro Abe, Elizabeth A. Ainsbury, L Alkebsi, Sally A. Amundson, Christophe Badie, Ans Baeyens, Adayabalam S. Balajee, Katalin Balázs, Stephen Barnard, C. Bassinet, Lindsay A. Beaton-Green, Christina Beinke, Laure Bobyk, P Brochard, Kamil Brzóska, Martin Bucher, B. Ciesielski, Corina Cuceu, Michael Discher, Deu C, Inmaculada Domı́nguez, Sven Doucha-Senf, Andreea Dumitrescu, Pham Ngoc Duy, F. Finot, Guy Garty, Shanaz A. Ghandhi, Eric Grégoire, Valerie Swee Ting Goh, I. Güçlü, Rita Hargitai, Rositsa Hristova, Kenji Ishii, Enikő Kis, Małgorzata Juniewicz, Ralf Kriehuber, Jérôme Lacombe, Y. Lee, Milagrosa López-Riego, Katalin Lumniczky, Tesigawara Mai, Nadica Maltar‐Strmečki, Maurizio Marrale, Javier Sánchez Martínez, Agnieszka Marciniak, Nataliya Maznyk, S. W. S. McKeever, Prabodha Kumar Meher, Margarita Milanova, Tomisato Miura, Octávia Monteiro Gil, Alegría Montoro, Mercedes Moreno Domene, Anna Mrozik, Ryo Nakayama, Gráinne O’Brien, Dominik Oskamp, Patrick Ostheim, Jelena Pajić, Nuria Pastor, Mònica Pujol-Canadell, María Jesús Prieto Rodríguez, Mikhail Repin, Alexander Romanyukha, Ute Rößler, Laure Sabatier, Akira Sakai, Harry Scherthan, Simone Schüle, Ki Moon Seong, Olga Sevriukova, S. Sholom, Sylwester Sommer, Yumiko Suto, Tetiana Sypko, Tünde Szatmári, M. Takahashi-Sugai, Katsushi Takebayashi, Antonella Testa, Isabelle Testard, Aleš Tichý, Sotiria Triantopoulou, Naohiro Tsuyama, Marcus Unverricht-Yeboah, Marco Valente, Olivier Van Hoey, Ruth C. Wilkins, Andrzej Wójcik, Maria Wojewódzka, Lee Younghyun, D. Zafiropoulos, M. Abend

Bibliographic record

VenueRadiation Research · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicRadiation Effects and Dosimetry
Canadian institutionsHealth Canada
FundersNational Institute of Allergy and Infectious DiseasesU.S. NavyMinistry of DefenseU.S. Department of Defense
KeywordsDosimetryDicentric chromosomeBiodosimetryIonizing radiationNuclear medicineMicronucleus testMedicineBiologyIrradiationToxicityPhysicsGeneticsChromosomeGeneInternal medicine

Abstract

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Tools for radiation exposure reconstruction are required to support the medical management of radiation victims in radiological or nuclear incidents. Different biological and physical dosimetry assays can be used for various exposure scenarios to estimate the dose of ionizing radiation a person has absorbed. Regular validation of the techniques through inter-laboratory comparisons (ILC) is essential to guarantee high quality results. In the current RENEB inter-laboratory comparison, the performance quality of established cytogenetic assays [dicentric chromosome assay (DCA), cytokinesis-block micronucleus assay (CBMN), stable chromosomal translocation assay (FISH) and premature chromosome condensation assay (PCC)] was tested in comparison to molecular biological assays [gamma-H2AX foci (gH2AX), gene expression (GE)] and physical dosimetry-based assays [electron paramagnetic resonance (EPR), optically or thermally stimulated luminescence (LUM)]. Three blinded coded samples (e.g., blood, enamel or mobiles) were exposed to 0, 1.2 or 3.5 Gy X-ray reference doses (240 kVp, 1 Gy/min). These doses roughly correspond to clinically relevant groups of unexposed to low exposed (0-1 Gy), moderately exposed (1-2 Gy, no severe acute health effects expected) and highly exposed individuals (>2 Gy, requiring early intensive medical care). In the frame of the current RENEB inter-laboratory comparison, samples were sent to 86 specialized teams in 46 organizations from 27 nations for dose estimation and identification of three clinically relevant groups. The time for sending early crude reports and more precise reports was documented for each laboratory and assay where possible. The quality of dose estimates was analyzed with three different levels of granularity, 1. by calculating the frequency of correctly reported clinically relevant dose categories, 2. by determining the number of dose estimates within the uncertainty intervals recommended for triage dosimetry (±0.5 Gy or ±1.0 Gy for doses <2.5 Gy or >2.5 Gy), and 3. by calculating the absolute difference (AD) of estimated doses relative to the reference doses. In total, 554 dose estimates were submitted within the 6-week period given before the exercise was closed. For samples processed with the highest priority, earliest dose estimates/categories were reported within 5-10 h of receipt for GE, gH2AX, LUM, EPR, 2-3 days for DCA, CBMN and within 6-7 days for the FISH assay. For the unirradiated control sample, the categorization in the correct clinically relevant group (0-1 Gy) as well as the allocation to the triage uncertainty interval was, with the exception of a few outliers, successfully performed for all assays. For the 3.5 Gy sample the percentage of correct classifications to the clinically relevant group (≥2 Gy) was between 89-100% for all assays, with the exception of gH2AX. For the 1.2 Gy sample, an exact allocation to the clinically relevant group was more difficult and 0-50% or 0-48% of the estimates were wrongly classified into the lowest or highest dose categories, respectively. For the irradiated samples, the correct allocation to the triage uncertainty intervals varied considerably between assays for the 1.2 Gy (29-76%) and 3.5 Gy (17-100%) samples. While a systematic shift towards higher doses was observed for the cytogenetic-based assays, extreme outliers exceeding the reference doses 2-6 fold were observed for EPR, FISH and GE assays. These outliers were related to a particular material examined (tooth enamel for EPR assay, reported as kerma in enamel, but when converted into the proper quantity, i.e. to kerma in air, expected dose estimates could be recalculated in most cases), the level of experience of the teams (FISH) and methodological uncertainties (GE). This was the first RENEB ILC where everything, from blood sampling to irradiation and shipment of the samples, was organized and realized at the same institution, for several biological and physical retrospective dosimetry assays. Almost all assays appeared comparably applicable for the identification of unexposed and highly exposed individuals and the allocation of medical relevant groups, with the latter requiring medical support for the acute radiation scenario simulated in this exercise. However, extreme outliers or a systematic shift of dose estimates have been observed for some assays. Possible reasons will be discussed in the assay specific papers of this special issue. In summary, this ILC clearly demonstrates the need to conduct regular exercises to identify research needs, but also to identify technical problems and to optimize the design of future ILCs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.135
metaresearch head score (Gemma)0.113
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.135
Threshold uncertainty score0.713

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1350.113
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0040.004
Science and technology studies0.0020.003
Scholarly communication0.0050.002
Open science0.0040.006
Research integrity0.0030.002
Insufficient payload (model declined to judge)0.0120.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.071
GPT teacher head0.388
Teacher spread0.316 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations28
Published2023
Admission routes1
Has abstractyes

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