MétaCan
Menu
Back to cohort
Record W4379259280 · doi:10.1038/s41597-023-02264-2

The FORCIS database: A global census of planktonic Foraminifera from ocean waters

2023· article· en· W4379259280 on OpenAlexaff
Sonia Chaabane, Thibault de Garidel‐Thoron, Xavier Giraud, Ralf Schiebel, Grégory Beaugrand, Geert-Jan A Brummer, Nicolas Casajus, Mattia Greco, Maria Grigoratou, Hélène Howa, Lukas Jonkers, Michal Kučera, Azumi Kuroyanagi, Julie Meilland, Fanny Monteiro, P. Graham Mortyn, Ahuva Almogi‐Labin, Hirofumi Asahi, Simona Avnaim‐Katav, Franck Bassinot, Catherine V. Davis, David Field, Iván Hernández‐Almeida, Barak Herut, Graham W. Hosie, Will Howard, Anna Jentzen, David G. Johns, Lloyd D Keigwin, John A. Kitchener, Karen E. Kohfeld, Douglas V.O. Lessa, Clara Manno, Margarita Marchant, Siri Ofstad, Joseph D. Ortiz, Alexandra L. Post, Andrés S. Rigual‐Hernández, Marina C. Rillo, Karen Robinson, Takuya Sagawa, Francisco Javier Sierro, Kunio Takahashi, Adi Torfstein, Igor M. Venâncio, Makoto Yamasaki, Patrizia Ziveri

Bibliographic record

VenueScientific Data · 2023
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicGeology and Paleoclimatology Research
Canadian institutionsSimon Fraser University
FundersNatural Environment Research CouncilLabex OT-MedMax-Planck-Institut für ChemieFondation pour la Recherche sur la BiodiversiteAgence Nationale de la RechercheSight Research UK
KeywordsForaminiferaCensusOceanographyPlanktonGeographyGeologyBenthic zonePopulationDemography

Abstract

fetched live from OpenAlex

Planktonic Foraminifera are unique paleo-environmental indicators through their excellent fossil record in ocean sediments. Their distribution and diversity are affected by different environmental factors including anthropogenically forced ocean and climate change. Until now, historical changes in their distribution have not been fully assessed at the global scale. Here we present the FORCIS (Foraminifera Response to Climatic Stress) database on foraminiferal species diversity and distribution in the global ocean from 1910 until 2018 including published and unpublished data. The FORCIS database includes data collected using plankton tows, continuous plankton recorder, sediment traps and plankton pump, and contains ~22,000, ~157,000, ~9,000, ~400 subsamples, respectively (one single plankton aliquot collected within a depth range, time interval, size fraction range, at a single location) from each category. Our database provides a perspective of the distribution patterns of planktonic Foraminifera in the global ocean on large spatial (regional to basin scale, and at the vertical scale), and temporal (seasonal to interdecadal) scales over the past century.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.042
Threshold uncertainty score0.083

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.005
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0110.015
Science and technology studies0.0010.000
Scholarly communication0.0010.002
Open science0.0020.003
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0110.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.073
GPT teacher head0.303
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueScientific DataSame topicGeology and Paleoclimatology ResearchFrench-language works237,207