MétaCan
Menu
Back to cohort

An intelligent machine learning model for real-time early detection of undesirable cancer events: AIM2REDUCE.

2023· article· en· W4379328789 on OpenAlexaff
Robert C. Grant, Muammar Kabir, Baijiang Yuan, Benjamin Grant, Sharon Narine, Kevin He, Rami Ajaj, Luna Jia Zhan, Aly Fawzy, Janine Xu, Yuhua Zhang, Vivien Yu, Conor French, Wei Xu, Rahul G. Krishnan, Steven Gallinger, Monika K. Krzyzanowska, Tran Truong, Geoffrey Liu

Bibliographic record

VenueJournal of Clinical Oncology · 2023
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of TorontoPrincess Margaret Cancer Centre
Fundersnot available
KeywordsMedicineInterquartile rangeCohortCancer registryCancerNomogramInternal medicine

Abstract

fetched live from OpenAlex

1557 Background: Cancer and its treatment cause undesirable cancer events (UCEs). Automated warning systems could reduce the frequency and severity of UCEs by alerting the healthcare team and allocating preventative interventions. Most previous studies predicted single UCEs at the initiation of treatment. In AIM2REDUCE, we developed and evaluated a general-purpose system for predicting UCEs during outpatient systemic anti-cancer therapy. Methods: Each time a patient receives treatment, AIM2REDUCE applies machine learning to the preceding data in the electronic medical record (EMR) to predict future UCEs. We identified patients treated for aerodigestive cancers from the EMR at Princess Margaret Cancer Centre, who were randomly split into development, validation, and test cohorts. Features included cancer diagnosis, treatment sessions with doses, laboratory tests, and patient-reported symptoms. UCEs are listed in the Table. We trained LASSO regression and random forests models in the training cohort and tuned hyperparameters in the validation cohort using Bayesian optimization. We evaluated performance across discrimination, calibration, and net benefit in the test cohort. Results: The cohort included 5,760 patients who received 175,565 treatment sessions, with 13,612,746 unique data points across 102 features. Of these patients, 2,352 (40.8%) were female, the median age was 64.0 years (interquartile range 14.0), the most common diagnoses were lung cancer (2,071, 36.0%) and pancreatic cancer (926, 16.1%), and the most common treatment regimens were weekly gemcitabine (433, 7.5%) and maintenance pemetrexed (417, 7.2%). The Table shows the performance of AIM2REDUCE. Conclusions: We demonstrate that longitudinal machine learning systems trained using EMR data can accurately predict a wide range of UCEs. Based on these results, automated warning systems should be implemented and evaluated in real-time clinical practice. [Table: see text]

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.013
Threshold uncertainty score0.027

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.126
GPT teacher head0.494
Teacher spread0.368 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueJournal of Clinical OncologySame topicRadiomics and Machine Learning in Medical ImagingFrench-language works237,207