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Record W4380894011 · doi:10.1002/alz.064204

Could microRNAs expressed in the tear fluids predict underlying molecular changes associated with Alzheimer’s disease (AD) at an early stage?

2023· article· en· W4380894011 on OpenAlexaff
Printha Wijesinghe, Jeanne Xi, Jing Cui, Matthew Campbell, Wellington Pham, Joanne A. Matsubara

Bibliographic record

VenueAlzheimer s & Dementia · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicroRNA in disease regulation
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsmicroRNAFold changeBiologyNeocortexDiseaseTaqManGenetically modified mousePathologyGene expressionGeneBioinformaticsMolecular biologyMedicineGeneticsReal-time polymerase chain reactionTransgeneNeuroscience

Abstract

fetched live from OpenAlex

Abstract Background Non‐coding small microRNAs (miRNAs) are a large family of post‐transcriptional regulators of gene expression and recent advances demonstrate their utility as disease biomarkers. Altered miRNA expression levels associated with AD have been reported in autopsy human brain samples, CSF and blood samples obtained from AD patients, and in AD animal models. However, due to the variabilities among samples and techniques from different labs, the potential applicability of miRNAs as biomarkers remains unclear. Here, we undertook a systematic study to assess the relative expression of ten candidate miRNAs in tear fluids and tissues obtained from eye and five brain regions of an AD mouse model at early and late stages. Our goal is to assess the unique differences among tear, eye and brain tissues to identify the most relevant miRNAs in tear fluids, which are collected non‐invasively, that best represent onset and progression of AD. Method Transgenic (Tg, APP/PS1), non‐Tg sibling, and wildtype (WT, C57BL/6J) female mice (n = 24, 4 per group) at two ages were studied (3‐4 months and 9‐10 months). Ten selected mature miRNAs were determined using single tube TaqMan advanced miRNA assays. A statistically significant (p <0.05, 2‐tailed Welch’s t‐test) intergroup >2‐fold difference (FD) was used to determine the differentially expressed miRNAs. Result Eight of the ten miRNAs were expressed at Ct <35.0. miR‐101a, potentially targeting amyloid precursor protein (APP), was significantly downregulated in the neocortex‐hippocampus of both young (p = 9.2×10−7, FD = 8.1) and old (p = 3.0×10−3, 3.0) Tg mice compared with its age‐matched WT controls. Importantly miRNAs ‐125b, ‐15a and ‐374c were significantly and consistently upregulated in the neocortex‐hippocampus, eye and tears of old Tg mice compared with its age‐matched WT control. Whereas all the tested miRNAs were downregulated or nonsignificant in the neocortex‐hippocampus, eye and tears of young Tg mice compared with its age‐matched WT control. Conclusion Our systematic study of miRNAs shows a consistent pattern of expression in the brain, eye and tears of an AD mouse model at two different ages. It also demonstrates the translational potential of tear fluids’ miRNAs in a Tg AD model with changes over time.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.285
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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