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Record W4381234500 · doi:10.23880/aii-16000136

Are Peptides Truly Less Important than Proteins, or are Peptides and Proteins Mutually Inclusive of Each other?

2021· article· en· W4381234500 on OpenAlexaff
Cheng JTJ

Bibliographic record

VenueAnnals of Immunology & Immunotherapy · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMachine Learning in Bioinformatics
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsChemistryComputational biologyBiochemistryBiology

Abstract

fetched live from OpenAlex

In today's research world, peptides and related functions are mostly undermined, undervalued, underappreciated, and sometimes maybe marginalized.It could be mainly due to the fact that peptides are shorter in amino acid length (less sequence conservation or variation), less structured (more random structures i.e., many do not form defined secondary structures), single-functioned (not as dual or even multifunctional), more direct-action oriented (less indirect and consequently more complex effects, e.g., signaling cascade events), and less global impacts (e.g., peptidomes are far less characterized than proteomes to date, due to either lack of interest or lack of available and validated tools and methods).These factors make peptides less attractive for research studies than their protein counterparts.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.011
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.008
Threshold uncertainty score0.024

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.011
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0010.002
Science and technology studies0.0010.008
Scholarly communication0.0080.013
Open science0.0010.002
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.303
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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