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Record W4383480988 · doi:10.1007/s12265-023-10403-8

A Systematic Analysis of the Clinical Outcome Associated with Multiple Reclassified Desmosomal Gene Variants in Arrhythmogenic Right Ventricular Cardiomyopathy Patients

2023· article· en· W4383480988 on OpenAlexafffund
E. Nagyova, Edgar T. Hoorntje, Wouter P. te Rijdt, Laurens P. Bosman, Petros Syrris, Alexandros Protonotarios, Perry Elliott, Adalena Tsatsopoulou, Luisa Mestroni, Matthew R.G. Taylor, Gianfranco Sinagra, Marco Merlo, Yuko Wada, Minoru Horie, Jens Mogensen, Alex Hørby Christensen, Brenda Gerull, Lei Song, Yan Yao, Siyang Fan, Ardan M. Saguner, Fırat Duru, Juha Koskenvuo, Tania Cruz Mariño, Crystal Tichnell, Daniel P. Judge, Dennis Dooijes, Ronald H. Lekanne Deprez, Cristina Basso, Kalliopi Pilichou, Barbara Bauce, Arthur A.M. Wilde, Philippe Charron, Véronique Fressart, Jeroen F. van der Heijden, Maarten P. van den Berg, Folkert W. Asselbergs, Cynthia A. James, Jan D.H. Jongbloed, Magdaléna Harakaľová, J. Peter van Tintelen

Bibliographic record

VenueJournal of Cardiovascular Translational Research · 2023
Typearticle
Languageen
FieldMedicine
TopicCardiovascular Effects of Exercise
Canadian institutionsCentre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-JeanLibin Cardiovascular Institute of Alberta
FundersCanadian Institutes of Health ResearchNational Institutes of HealthGeorg und Bertha Schwyzer-Winiker-StiftungNational Heart, Lung, and Blood InstitutePeter French Memorial FoundationHartstichtingSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungFondation LeducqNederlandse Organisatie voor Wetenschappelijk OnderzoekSchweizerische HerzstiftungFondazione Cassa di Risparmio di Gorizia
KeywordsMedicineCardiologyCardiomyopathyInternal medicineArrhythmogenic right ventricular dysplasiaHuman geneticsGeneGeneticsHeart failureBiology

Abstract

fetched live from OpenAlex

The presence of multiple pathogenic variants in desmosomal genes (DSC2, DSG2, DSP, JUP, and PKP2) in patients with arrhythmogenic right ventricular cardiomyopathy (ARVC) has been linked to a severe phenotype. However, the pathogenicity of variants is reclassified frequently, which may result in a changed clinical risk prediction. Here, we present the collection, reclassification, and clinical outcome correlation for the largest series of ARVC patients carrying multiple desmosomal pathogenic variants to date (n = 331). After reclassification, only 29% of patients remained carriers of two (likely) pathogenic variants. They reached the composite endpoint (ventricular arrhythmias, heart failure, and death) significantly earlier than patients with one or no remaining reclassified variant (hazard ratios of 1.9 and 1.8, respectively). Periodic reclassification of variants contributes to more accurate risk stratification and subsequent clinical management strategy. Graphical Abstract.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.071
GPT teacher head0.358
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSystematic review
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2023
Admission routes2
Has abstractyes

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