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Record W4384070587 · doi:10.1093/noajnl/vdad071.050

EVALUATING HUMAN MICROBIOME SIGNATURES ASSOCIATED WITH DEVELOPMENT, OUTCOME, AND TREATMENT RESPONSE IN GLIOMA AND BRAIN METASTASIS: A SCOPING REVIEW

2023· review· en· W4384070587 on OpenAlexaff
Jennifer Leigh, Brian Hutton, Saman Maleki Vareki, Tony L. Ng

Bibliographic record

VenueNeuro-Oncology Advances · 2023
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsMicrobiomeGliomaDysbiosisHuman Microbiome ProjectHuman microbiomeMedicineBrain tumorHuman brainBioinformaticsOncologyBiologyPathologyCancer research

Abstract

fetched live from OpenAlex

Abstract The human microbiome is made up of over 500 species of bacteria in the body. Microbiome dysbiosis has been implicated in cancer development and treatment response, including in both primary brain tumors and brain metastases, by acting through the gut-brain axis. We conducted a scoping review of the current evidence surrounding the human microbiome and brain tumors. METHODS: A systematic search of relevant studies and abstracts from 5 electronic databases from 1946-2023 was conducted based on a search strategy developed by an information specialist. Eligible studies included human, in vivo, or in vitro studies that focused on the relationship between microbiome and glioma and brain metastasis development, response to therapies, and outcomes. RESULTS: Of 383 citations, 31 studies met inclusion criteria, including 15 articles and 16 conference abstracts. There were 19 human studies and 18 mouse studies, of which 24 studies focused on glioma and 7 studies focused on brain metastases. They either characterized the microbiome in patients with brain tumors (n=19) or its correlation to systemic therapies for glioma (n=12). Changes in the Firmicutes/Bacteroidetes ratio, which is a marker of dysbiosis in patients with brain tumors was observed in 7 studies; however, the direction of change varied. Microbiome dysbiosis seemed to occur in response to both immunotherapy (5 studies) and temozolomide (3 studies), with variable impacts on treatment response. CONCLUSION: Evidence surrounding the impact of the gut-brain axis on brain tumors remains in its infancy with a large amount of heterogeneity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.838
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.128
GPT teacher head0.478
Teacher spread0.349 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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