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Phragmotrichum chailletii has a sibling species in North America

2023· article· en· W4384339431 on OpenAlexaboutno aff
Ondřej Koukol, Ludwig Beenken, Gregorio Delgado

Bibliographic record

VenueNova Hedwigia · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsnot available
Fundersnot available
KeywordsSibling speciesSiblingGeographyEcologyBiologyZoologyAnthropologySociology

Abstract

fetched live from OpenAlex

The phylogenetic placement of <em>Phragmotrichum chailletii </em>in Melanommataceae (Pleosporales) is re-evaluated and its phylogeographic structure is assessed based on a large number of specimens from Europe and North America together with a four-gene (ITS, LSU, <em>RPB2</em>, <em>EF1-α</em>) dataset. Morphologically, all collections produced identical conidiomata and conidia on the same substrate, which is spruce cones on litter. Their fruiting season was also similar as they originated from early spring soon after snow melts at a similar range of elevation. However, all isolates collected in Canada and associated with <em>Picea</em> species native to North America, clustered together in a clade separate from collections made in Europe and occurring on host species native to central-eastern Europe. A sibling species, <em>Ph. thornhilliae</em>, is introduced to accommodate this group of isolates using molecular and phylogeographic evidence. One specimen belonging to the novel species was also collected in Switzerland. Possible scenarios to explain this anomaly are provided and the most likely explanation is an accidental, human mediated introduction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.558
Threshold uncertainty score0.994

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0080.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.060
GPT teacher head0.238
Teacher spread0.178 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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