MétaCan
Menu
Back to cohort
Record W4384404812 · doi:10.1101/2023.07.14.549064

Kin-recognition shapes collective behaviors in the cannibalistic nematode <i>Pristionchus pacificus</i>

2023· preprint· en· W4384404812 on OpenAlexfundno aff
Fumie Hiramatsu, James W. Lightfoot

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEvolution and Genetic Dynamics
Canadian institutionsnot available
FundersNational Institutes of HealthMax-Planck-GesellschaftDeutsche ForschungsgemeinschaftYork University
KeywordsBiologyCaenorhabditis elegansNematodeAdaptation (eye)Kin recognitionEvolutionary biologyPredationCompetition (biology)EcologyGeneticsGeneNeuroscience

Abstract

fetched live from OpenAlex

Abstract Kin-recognition is observed across diverse species forming an important behavioral adaptation influencing organismal interactions. In most species, proximate level mechanisms are poorly characterized, but in the nematode Pristionchus pacificus molecular components regulating its kin-recognition system have been identified which determine its predatory behaviors. This ability prevents the killing of kin however, its impact on other interactions including collective behaviors is unknown. Utilizing pairwise aggregation assays between distinct strains of P. pacificus , we observed aggregation between kin but not distantly related con-specifics. In these assays, only one strain aggregates with solitary behavior induced in the rival. Abolishing predation through Ppa-nhr-40 mutations results in rival strains successfully aggregating together. Additionally, interactions between P. pacificus populations and Caenorhabditis elegans are dominated by P. pacificus which also disrupts C. elegans aggregation dynamics. Thus, aggregating strains of P. pacificus preferentially group with kin, revealing competition and nepotism as previously unknown components influencing collective behaviors in nematodes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.241
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)Same topicEvolution and Genetic DynamicsFrench-language works237,207