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Perspectives for the use of genomic selection for genetic improvement of dairy cattle in Ukraine

2023· article· en· W4384569558 on OpenAlexaboutno aff
Sergei Ruban, Victor Danshin

Bibliographic record

VenueUKRAINIAN BLACK SEA REGION AGRARIAN SCIENCE · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsnot available
Fundersnot available
KeywordsSelection (genetic algorithm)Genomic selectionBest linear unbiased predictionBiologyDairy cattleBiotechnologyBreedDual purposeAnimal scienceGenetic gainAnimal breedingAgricultural scienceSingle-nucleotide polymorphismGenetic variationGeneticsGenotypeComputer scienceEngineeringGene

Abstract

fetched live from OpenAlex

An important problem in modern dairy cattle breeding is the achievement of a high level of genetic progress in economically important traits through the implementation of effective breeding programs. For this purpose, genomic selection is currently used in many countries of the world. The aim of the study was to investigate possibilities of use of genomic selection in dairy cattle breeding in Ukraine. On the basis of analysis of “Catalogue of sires of dairy and dual-purpose breeds for reproduction of cows in 2020” (sperm of these sires was used in Ukraine) two methods of breeding value estimation were compared: 1) traditional method based on pedigree and performance of progeny; 2) genomic method based on effects of SNPs. Considerable advantage of sires with genomic evaluations was proved. These sires excel sires with traditional evaluation for milk yield by 1.6 times, for fat percentage by 2.2 times, for fat yield by 1.7 times, for protein percentage by 2.1 times and for protein yield by 1.7 times. Using estimates of breeding values of sires pare-wise genetic correlations between main genetic traits were computed. The negative genetic relationship between milk yield and fat and protein percentages was revealed. Values of energy corrected milk (ECM) of daughters and dams of sires across breeds and countries of origin were calculated. It was shown that dams of sires of Holstein and Jersey breeds had highest values of energy corrected milk (9,132.0 kg and 8,041 kg, respectively) while dams of sires of Ukrainian Black-and-White dairy breed had lowest values of this trait (5,848.1 kg). According to country-of-origin daughters of sire’s form USA, Canada and the Netherlands had highest values of energy corrected milk. Values of response to selection using traditional breeding program and genomic selection were compared. It was proved that by means of shortening generation intervals on pathways of genetic improvement “sires of bulls”, “sires of cows” and “dams of bulls” using genomic selection it is possible to increase rate of genetic progress for milk yield from 100.1 kg to 180.0 kg that is by 80%

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.817
Threshold uncertainty score0.378

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.275
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2023
Admission routes1
Has abstractyes

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