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Record W4384701476 · doi:10.1016/j.softx.2023.101469

FIPEX v10.4: An ArcGIS Desktop Add-in for assessing impacts of fish passage barriers and longitudinal connectivity of rivers

2023· article· en· W4384701476 on OpenAlexafffund
Greig Oldford, David Côté, Dan Kehler, Gabrielle R. Riefesel, Yolanda F. Wiersma

Bibliographic record

VenueSoftwareX · 2023
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsParks CanadaMemorial University of NewfoundlandUniversity of British ColumbiaFisheries and Oceans Canada
FundersFisheries and Oceans CanadaNatural Sciences and Engineering Research Council of CanadaDalhousie UniversityParks Canada
KeywordsBiomeComputer scienceFish <Actinopterygii>Environmental scienceEnvironmental resource managementHydrology (agriculture)Water resource managementEcologyFisheryEcosystemGeology

Abstract

fetched live from OpenAlex

FIPEX v10.4 is designed to decrease the time required to assess the individual and cumulative effects of river barriers to fish passage and to assess river connectivity from headwaters to outflow (i.e., longitudinal connectivity) Loss of longitudinal connectivity due to anthropogenic barriers is a global problem contributing to unprecedented biodiversity loss in freshwater biomes. Yet, assessing longitudinal connectivity from the perspective of fish and prioritizing ecological restoration is challenging without specialized tools. The Fish Passage Extension (FIPEX) v10.4 is designed to bridge network analysis and Geographic Information System (GIS) in support of river connectivity assessments. It is developed as an open source VB.NET ‘Add-In' for ArcGIS Desktop (v10.4+) with an option to run R statistical software scripts to calculate the Dendritic Connectivity Index (DCI).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.009
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: Software
Teacher disagreement score0.139
Threshold uncertainty score0.465

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.009
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0040.004
Science and technology studies0.0010.001
Scholarly communication0.0020.003
Open science0.0030.003
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.1390.048

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.274
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2023
Admission routes2
Has abstractyes

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