A risk scoring model of COVID-19 at hospital admission
Bibliographic record
Abstract
BACKGROUND: The COVID-19 pandemic has been the most serious public health crisis in recent times, a pandemic whose impact was felt across the globe in various groups and populations. Confronted with an urgent problem, people and governments were forced to make decisions without fully understanding the disease. The present work aims to reinforce our ever-growing knowledge of the illness, particularly in modelling the risk of death of a patient admitted to a hospital with a positive COVID-19 test. METHODS: Given the simplicity of using and programming logistic regression in any national healthcare unit and the ease of interpreting the results, we chose to use this technique over several other. Using scoring techniques, it is possible to associate the various diagnoses with a numerical value (score), making it possible therefore to integrate the patient's multiple medical conditions as a single continuous variable in the model. RESULTS: It is possible to establish with good discriminatory capacity (ROC AUC Test = 0.8) which COVID patients are at higher risk when admitted to the healthcare unit-people of advanced age with pre-existing conditions, such as diabetes and high blood pressure, or newly acquired conditions, such as pneumonia. Moreover, males and clinical episodes occurring in healthcare units with few available beds (high healthcare unit occupancy) are also at higher risk. The importance of each variable in predicting the target is: age (47%), sum of comorbidity scores (28%), healthcare unit score (12.0%), gender score (7%) and healthcare unit occupancy (6%). CONCLUSIONS: Using a dataset with more than 52000 people, it was possible to successfully differentiate likelihood of death by COVID using age, comorbidity information, healthcare unit, healthcare unit occupancy and gender. The age and the comorbidities associated with each patient had a joint contribution of about 75% in explaining the COVID related mortality in Portuguese public hospitals in the period between March 2020 and May 2021.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.004 | 0.008 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.002 | 0.001 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.003 | 0.001 |
| Open science | 0.003 | 0.001 |
| Research integrity | 0.002 | 0.002 |
| Insufficient payload (model declined to judge) | 0.006 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".