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Record W4385417806 · doi:10.1111/ejss.13402

<scp>Biodiesel Co‐Product</scp> ( <scp>BCP</scp> ) amendment drives beneficial soil microbiome assembly promoting acid soil health

2023· article· en· W4385417806 on OpenAlexaff
Qunli Shen, Paul Voroney, Philip C. Brookes, Ahmed S. Elrys, Mengjie Yu, Weiqin Su, Lei Meng, Meng Li

Bibliographic record

VenueEuropean Journal of Soil Science · 2023
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversity of Guelph
FundersChinese Government ScholarshipShenzhen University
KeywordsAmendmentProteobacteriaAscomycotaBiologyMicrobial population biologyMicrobiomeSoil microbiologyMicrobiologyBotanySoil water16S ribosomal RNAEcologyBacteriaBiochemistryGeneBioinformaticsGenetics

Abstract

fetched live from OpenAlex

Abstract Biodiesel Co‐Product (BCP) amendment has been shown to decrease both nitrate leaching and nitrous oxide (N 2 O) emissions in acidic soil; however, the effects of BCP on the soil microbiome have not been investigated thoroughly. In this study, we investigated the response of prokaryotic and fungal communities in aspects of structure, diversity, and co‐occurrence network to the BCP amendment following complete mixing application (0–18‐cm depth) of 1.5 mg BCP‐C g −1 and surface application (0–6‐cm depth) of 4.5 mg BCP‐C g −1 via high‐throughput 16S rRNA and internal transcribed spacer (ITS) amplicon sequencing. The amendment altered microbial communities significantly by increasing the relative abundances of Proteobacteria ( Burkholderia ) and Ascomycota ( Trichoderm a) in prokaryotic and fungal communities, respectively. Only a higher rate application (4.5 mg BCP‐C g −1 ) decreased prokaryotic alpha diversity, whereas all rates of amendment decreased fungal diversity. The co‐occurrence network of prokaryotes had more nodes and links and a higher average degree and clustering coefficient than the fungal network with BCP addition. The majority of keystone species in prokaryotic and fungal networks were from Proteobacteria and Ascomycota taxa. Of note, the BCP amendment significantly increased the OTU numbers of potential biocontrol agents, including Trichoderma ( T. ) spirale , T. koningiopsis , and T. virens , etc., while decreased OTU numbers related to plant pathogens species, particularly in the complete mixing application. Our work highlights the potential for BCP amendments to promote the assembly of a healthy soil microbiome by enhancing the abundance of potential biocontrol microbes while reducing plant pathogens species, which may contribute to soil health.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.259
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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