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Record W4385550818 · doi:10.31219/osf.io/kn5f2

Performance Analysis of Large Language Models for Medical Text Summarization

2023· preprint· en· W4385550818 on OpenAlexaff
Jaskaran Singh, Tirth Patel, Amandeep Singh

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldComputer Science
TopicTopic Modeling
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsAutomatic summarizationPaceRelevance (law)Computer scienceUnified Medical Language SystemMedical literatureData scienceNatural language processingMedicinePathology

Abstract

fetched live from OpenAlex

Due to the rapid expansion of medical literature, keeping pace with the latest research and clinical guidelines has become more challenging for healthcare professionals.To overcome this challenge, effective text summarization is crucial for improving access to knowledge, enhancing clinical decision-making, and ultimately benefiting patient outcomes. In this study, a medical text summarization system that employs large language models (LLMs) was fine-tuned and evaluated with the objective of generating precise, logical, and brief summaries of medical literature, emphasizing clinical relevance and ease of understanding. We plan to evaluate the performance of GPT3, GPT4 and the fine-tuned T5, BART, and Pegasus models trained on the standard PubMed dataset using standard evaluation metrics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.888
Threshold uncertainty score0.486

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.306
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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