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Record W4385967812 · doi:10.5281/zenodo.8213197

Bridging Traditional and scientific knowledge through a novel predictive approach to understand the role of pathogens in the decline of a key Arctic species

2023· report· en· W4385967812 on OpenAlexaff
Benjamin J. Padilla, O. Alejandro Aleuy, Petter Jacobsen, Mathieu Pruvot, Susan Kutz

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2023
Typereport
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIdentification and Quantification in Food
Canadian institutionsTlicho Community Services AgencyUniversity of Calgary
Fundersnot available
KeywordsBridging (networking)Key (lock)ArcticData scienceGeographyBiologyEcologyComputer science

Abstract

fetched live from OpenAlex

The main objective of this project is to understand and quantify the potential role of parasites and pathogens in population dynamics and declines of barren-ground caribou (Rangifer tarandus groenlandicus) through ecological modeling and Indigenous observation and monitoring. We hypothesized that the costs of diseases will have a negative impact on caribou physiology and, as a direct consequence, a negative impact on caribou population dynamics. This is likely to be a combination of cumulative effects through subtle energetic mechanisms such as decreasing body condition and pregnancy rates, as well as direct mortality, fetal abortion, or infertility. We built a bio-energetic integral projection model to evaluate the impact of parasites and biting insects on caribou body condition, and as a result, caribou population dynamics. Results from this model demonstrate the significant impact that sub-lethal infection and behavioural modifications caused by parasites and insect pests can have on caribou. We then parameterized the model with environmental data from the Bathurst herd’s range between 1980 and 2020, when population declines occurred. This parameterization resulted in a greater than 50% population decline. While this did not perfectly capture observed declines of the Bathurst herd, it demonstrates the contribution that parasites and insect pests may have played. These results are feeding back into monitoring by directing efforts of Ekwǫ̀ Nàxoèhdee K’è to focus on caribou health, and the modeling framework can be used to forecast possible demographic trends under anticipated environmental conditions. This database includes data objects with results from baseline analyses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.789
Threshold uncertainty score0.517

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.172
GPT teacher head0.306
Teacher spread0.133 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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Same venueZenodo (CERN European Organization for Nuclear Research)Same topicIdentification and Quantification in FoodFrench-language works237,207