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Record W4386100084 · doi:10.21203/rs.3.rs-3267072/v1

Removal of soluble Se from mining influenced water by native mine site bacteria depends on the consortium composition

2023· preprint· en· W4386100084 on OpenAlexafffund
Frank Nkansah-Boadu, Ido Hatam, Stéphane Flibotte, Susan A. Baldwin

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldNursing
TopicSelenium in Biological Systems
Canadian institutionsUniversity of British Columbia
FundersGenome British Columbia
KeywordsSelenateEnvironmental chemistryMicroorganismBacteriaBioaccumulationBioremediationNitrateChemistryMetagenomicsBiodegradationSeleniumBiologyBiochemistry

Abstract

fetched live from OpenAlex

Abstract Soluble Se compounds are of great concern in mine influenced water (MIW) from many coal and metal mines due to Se bioaccumulation in aquatic environments and toxicity to birds and fish. Biological treatment to remove soluble Se to regulated levels, which are on the orders of µg-Se/L, is challenging due to the chemical and biological complexity of MIW. For instance, co-contaminant nitrate can inhibit selenate reduction. Native bacteria consortia from mine impacted aquatic environments are sources for known and novel selenate reducing bacteria. In this study, two consortia of native bacteria enriched from different locations on a coalmine known to exhibit elevated release of Se were tested for their ability to remove soluble Se from a typical MIW in sequencing batch bioreactors. One consortium, enriched from an impacted natural vegetated wetland known to harbour native microorganisms involved in selenate-Se reduction, when inoculated into MIW achieved limited soluble Se removal in the presence of nitrate. The other consortium enriched from a disused tailing storage facility achieved greater removal of soluble Se in the presence of nitrate. Genome-resolved metagenomics were used to identify and track consortium members and identify putative novel selenate reducing microorganisms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.121
GPT teacher head0.393
Teacher spread0.272 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

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